| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0389 |
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| Symbol | |
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| ID | 4078622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 396997 |
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| End bp | 398121 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005684 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_612384 |
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| Protein GI | 99080230 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCGC TTCATGGCCT CAAGGTTGTT GAACTCGCCC GCATTCTGGC TGGTCCCTGG
ATTGGTCAGG CGCTCGCGGA TCTGGGCGCC GAAGTGGTCA AGGTCGAAAG CCCCGAGGGT
GATGACACCC GCCGCTGGGG GCCGCCCTTT GTGGAGCGGG AGGGTGACAA AACGGCCGCC
TACTATTATG CCGCCAACCG GGGCAAGACC TGTGTCACGG CTGATTTTCG CACATCAGAG
GGGCAGGCCC AGGTGCGCGA TCTGGTCCGC GATGCCGACA TTCTGATCGA GAATTTCAAA
GTGGGCGGGC TGAAGAAATA TGGCCTGGAT TTCGAGAGCC TCTCCGCTCT CAATCCGCGT
CTGATCTATT GCTCTGTCAC CGGATTTGGT CAGGATGGTC CCTATGCGAC GCGCGCGGGG
TATGACTTCT TGCTGCAGGG CATGTCGGGG CTGATGTCGA TCACCGGGGC CGCCGATGGG
GAGCCGCAAA AGGTTGGCGT GGCGATCACG GATGTGGTGA CGGGGCTTTA TGGCAGCATC
GGTATTCTGG CAGCGGTGGA GCAGCGGCAC CGCACCGGGC GGGGGCAGCA TATCGATATG
TCCTTGCTCG ATTGCGCCAC AGCGATGTTG GCCAATCAGA ACATGAACTA TCTGGTAACC
GGGGAAAGCC CCACCCGAAT GGGCAATGAA CATCCCAATA TCGCACCCTA TCAGGTGATG
GCGGTGCGCG ATGGTCATGT CATTCTTGCG GTTGGCAATG ATGGTCAGTT CACCCGACTG
TGCGATGTGC TTAACCTTGC AGGGCTCAAG GATGATCCGC GCTTTTCCAC CAACCAGCTG
CGGGTGGCGC ACCGTGCAGA TTTGACGCCG CTGCTGGCGG CGGCGCTTGC ACAGTGGAGC
CAGTCGGATT TGCTGGCTGC GCTTGAGGCC GCGACCGTTC CGGCTGGGCC GATCAACACC
ATCGGGCAGG CTTTTGAGGA TGCGCAGATC AAACATCGTC AGATGCAGAT TGCGCCCGAG
GGCGTGCCAG GCGTGCGGGG GCCTTGGGTA TTTTCTGACG CGGACCTGGC GCTTGACCGC
TCGGCCCCCG TCCTGCCGCG CGACACGAAG CCCGAGAAAG ATTAA
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| Protein sequence | MTPLHGLKVV ELARILAGPW IGQALADLGA EVVKVESPEG DDTRRWGPPF VEREGDKTAA
YYYAANRGKT CVTADFRTSE GQAQVRDLVR DADILIENFK VGGLKKYGLD FESLSALNPR
LIYCSVTGFG QDGPYATRAG YDFLLQGMSG LMSITGAADG EPQKVGVAIT DVVTGLYGSI
GILAAVEQRH RTGRGQHIDM SLLDCATAML ANQNMNYLVT GESPTRMGNE HPNIAPYQVM
AVRDGHVILA VGNDGQFTRL CDVLNLAGLK DDPRFSTNQL RVAHRADLTP LLAAALAQWS
QSDLLAALEA ATVPAGPINT IGQAFEDAQI KHRQMQIAPE GVPGVRGPWV FSDADLALDR
SAPVLPRDTK PEKD
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