| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0388 |
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| Symbol | |
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| ID | 4078621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 395726 |
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| End bp | 396619 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638005683 |
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| Product | urease accessory protein UreD |
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| Protein accession | YP_612383 |
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| Protein GI | 99080229 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0829] Urease accessory protein UreH |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.784238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGG CCGCAGATAT CGCGACAGCG CCCCAACGCC CAAGCGCCCC TGGGGATGTT
GTGGCAGCTG GTCAGCCGCC GCGCGCTCGG GGGCGGGCCC ATGTCAGCAG CAAACGGCGC
GATGATGGCG CAGTAGCCCT CGATACGCTT CACCAATCCG GGGCGCTGAA GCTTCTGTTC
CCGACTGGTC GGCCAGATCT TGAGGCGGTG ACTGTCAACA CTGCAGGCGG CATCACGGGC
GGTGATGACT TCGCGCTGAC GGCCAAGGCT GGCGCCCAAA GCCAGCTCAC CCTGACAACA
CAAGCCGCCG AACGGGTCTA TCGCGCACAG CCGCATCAGA CCGGACAGAT GACAACGCGG
CTGAGCGTGG AGCCACAAGC GCGCCTTCGA TGGGTGCCGC AAGAGACAAT CCTGTTTCAG
CACAGCGCCT TCCGGCGCAG CCTTCATGTG GAACTCGCCG ACGATGCGGA GCTCTTGCTG
GTCGAGCCGC TTGTCTTTGG CCGCGTCGCC ATGGGCGAGC ATCTCTCCGC GCTGCGCTTT
CACGACCAGA TCCAGATCCG ACGCGCAGGG CGCATCCTCT TTCGCGATGC AATCCGGCTC
GACGGGGATG CTATGGCTCA GCTCAAGCGC CCGGGCATTG CCGGCGTTCT GTCTGGCCCC
TGCACCGCCA TGGTCACACT CGTTCTGGCA AGCCCCGGTG CCGAAGCCGC CTTGGCGTGG
CTGCGCACTC AGTTGCCTGC GGGCAAAGAG GCCTATGGCG GGGCGTCCCT CCTCGCGCCG
AATCTGTTGC ATATGCGGCT TCTGGCGCGC GACAGTTTTG TCTTACGCCA GAGCCTCTTG
CCCATTCTTG ACAAGCTCAC CGAGGGCAGC CTGCCCCGAT GCTGGAGACT TTGA
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| Protein sequence | MPQAADIATA PQRPSAPGDV VAAGQPPRAR GRAHVSSKRR DDGAVALDTL HQSGALKLLF
PTGRPDLEAV TVNTAGGITG GDDFALTAKA GAQSQLTLTT QAAERVYRAQ PHQTGQMTTR
LSVEPQARLR WVPQETILFQ HSAFRRSLHV ELADDAELLL VEPLVFGRVA MGEHLSALRF
HDQIQIRRAG RILFRDAIRL DGDAMAQLKR PGIAGVLSGP CTAMVTLVLA SPGAEAALAW
LRTQLPAGKE AYGGASLLAP NLLHMRLLAR DSFVLRQSLL PILDKLTEGS LPRCWRL
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