| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0385 |
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| Symbol | ureC |
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| ID | 4078618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 393082 |
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| End bp | 394794 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005680 |
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| Product | urease subunit alpha |
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| Protein accession | YP_612380 |
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| Protein GI | 99080226 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
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| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCA ACATCCCTCG CTCTGACTAT GCCGCCATGT ATGGGCCGAC CACCGGCGAC
CGCGTGCGGC TGGCCGATAC TGACCTGATC ATCGAGGTGG AGCGCGACCT CACCGGCCCT
TACGGCGAAG AGGTCAAATT TGGCGGCGGC AAGGTGATCC GCGACGGGAT GGGACAGGCG
CAGACGACGC GCGCGGGCGG CGCGGTCGAT ACCGTGATTA CCAACGCGCT GATCCTTGAT
TGGACCGGCA TCTACAAGGC TGACGTCGGG CTGAAAGACG GGCGCATCCA TGCCATCGGT
AAGGCCGGCA ACCCCGACAC TCAACCCAAT GTGACCATTA TCGTTGGCCC CGGCACCGAG
GTGATCGCGG GCGAAGGGCG CATCCTGACG GCAGGCGGGT TTGACAGCCA TATCCATTAT
ATCTGCCCGC AACAGATCGA GGATGCGCTG CACTCGGGTC TGACCACCAT GCTCGGCGGC
GGCACCGGGC CAGCCCATGG GACTTTGGCC ACCACCTGCA CCCCCGGTGC CTGGCACCTG
GGTCGGATGA TGCAGGCCGC AGATGCGTTT CCGATGAACC TGGCGTTTGC AGGCAAAGGG
AATGCCTCGC TGCCCGCCGC CATTGAAGAA CAGGTTAACG CAGGCGCCTG CGCGCTGAAA
CTGCATGAGG ACTGGGGCAC CACACCCGCT GCCATCGACT GCTGCCTCGG GGTGGCCGAT
GCAATGGATG TGCAGGTGAT GATCCATACA GACACGCTCA ATGAGTCGGG GTTTGTGGAA
CACACCGTCA AGGCCATGAA AGGCCGCACC ATCCACGCCT TTCACACCGA AGGTGCGGGC
GGTGGCCACG CACCGGACAT CATCAAGATC TGCGGTGAGG AGTTCGTGTT GCCCTCCTCG
ACCAACCCGA CCCGCCCCTT CACCGTGAAC ACCATCGAAG AGCACCTCGA CATGCTCATG
GTCTGTCATC ACCTCGACAA ATCCATCCCC GAGGATGTGG CCTTTGCCGA GAGCCGGATC
CGGCGCGAAA CCATTGCCGC CGAGGACATC CTGCACGACA TGGGGGCCTT CTCGATCATC
GCAAGCGACA GCCAGGCGAT GGGACGCGTG GGCGAGGTCA TCATTCGCAC ATGGCAGACC
GCAGACAAGA TGAAGAAACA GCGCGGCCGC CTGAGCGAGG AAACAGGTGA GAACGACAAC
TTTCGCGTGC GGCGCTATGT GGCAAAATAC ACCATCAACC CGGCGATCGC GCATGGGATC
GCGCATGAAA TTGGCTCTAT CGAGGTGGGC AAGCGCGCGG ATCTGGTGCT GTGGAACCCA
GCCTTCTTTG GTGTAAAGCC CGAGATGGTC CTGATGGGCG GCACCATCGC CTGCGCGCAA
ATGGGCGATC CCAACGCCTC CATTCCGACG CCGCAGCCGG TCTATTCGCG TCCCATGTGG
GGCGCTTACG GGCGCTCGGT CGAGCATTCT GCCGTCACCT TTGTGTCCGA GGCCGCGCAG
GCCGCAGGCA TCGGTAAGAC ACTGGGTCTT GCAAAACAGA CACTTGCGGT AAAGGGCACA
CGCGGGATCG GGAAGTCAGC ACTCAAGCTC AACACCGCCA CGCCTGAGAT CGAGGTTCAC
CCTGAAACCT ATGAGGTACG CGCGAATGGG GAGCTTTTGA CCTGTCAGCC CGCCGAGGAA
CTGCCCTTGG CACAGCGATA TTTCCTCTTC TAA
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| Protein sequence | MPANIPRSDY AAMYGPTTGD RVRLADTDLI IEVERDLTGP YGEEVKFGGG KVIRDGMGQA
QTTRAGGAVD TVITNALILD WTGIYKADVG LKDGRIHAIG KAGNPDTQPN VTIIVGPGTE
VIAGEGRILT AGGFDSHIHY ICPQQIEDAL HSGLTTMLGG GTGPAHGTLA TTCTPGAWHL
GRMMQAADAF PMNLAFAGKG NASLPAAIEE QVNAGACALK LHEDWGTTPA AIDCCLGVAD
AMDVQVMIHT DTLNESGFVE HTVKAMKGRT IHAFHTEGAG GGHAPDIIKI CGEEFVLPSS
TNPTRPFTVN TIEEHLDMLM VCHHLDKSIP EDVAFAESRI RRETIAAEDI LHDMGAFSII
ASDSQAMGRV GEVIIRTWQT ADKMKKQRGR LSEETGENDN FRVRRYVAKY TINPAIAHGI
AHEIGSIEVG KRADLVLWNP AFFGVKPEMV LMGGTIACAQ MGDPNASIPT PQPVYSRPMW
GAYGRSVEHS AVTFVSEAAQ AAGIGKTLGL AKQTLAVKGT RGIGKSALKL NTATPEIEVH
PETYEVRANG ELLTCQPAEE LPLAQRYFLF
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