| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0381 |
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| Symbol | |
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| ID | 4078614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 390856 |
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| End bp | 391500 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005676 |
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| Product | urease accessory protein UreF |
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| Protein accession | YP_612376 |
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| Protein GI | 99080222 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0830] Urease accessory protein UreF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.11359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGTG AGGCGACGCT GAAGCTGATG CAATGGCTTT CGCCGGCCTA TCCGGTGGGG
GCTTTTGCCT ATTCGCACGG GCTCGAAGGC GCCGTCTCAG AGGGGCATGT GCGCGACGGG
GACACATTGT CGGACTGGCT GAGCGACCTG CTGACCCATG GTGGCGCGCG CTCGGATGCG
CTGCTCTTGG CCTGTGCCTA TCGCACAGAA ACCGCAGAGT CGCTGGCGGA GATCGACGAC
ACCGCGCGCG CGTTTTGCCC CTCGGCGGAA CGTCTGCAGG AGACCGACCT GCAGGGCGCG
GCCTTTTGTC GGACCACGGC CGCGATCTGG GACACAGCAT TGCCTAGCCT CACCTACCCC
GTGGCCGTGG GGCACGCGGC CAGACTCAAT GATGTTGCGC TGGATCTTAC GCTGAACATG
TATCTGCATG CCTTCCTCTC CAACCTTGTT GCGGCCGGTC AAAGGCTTCT TTCGCTTGGA
CAGACGGAGG CACAGCAACG CCTCAACGCC TGCGGGCCAC AACTGCGCAG GACGGTCGAC
GCGGCGCTCT CGGGTACGAT CGACGATCTC TTTGGTGCGA GTTTTGCCGC CGATATTGCC
TCCATGCGCC ATGAAACCCA ATATTCGAGG ATCTTTCGCT CATGA
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| Protein sequence | MTSEATLKLM QWLSPAYPVG AFAYSHGLEG AVSEGHVRDG DTLSDWLSDL LTHGGARSDA
LLLACAYRTE TAESLAEIDD TARAFCPSAE RLQETDLQGA AFCRTTAAIW DTALPSLTYP
VAVGHAARLN DVALDLTLNM YLHAFLSNLV AAGQRLLSLG QTEAQQRLNA CGPQLRRTVD
AALSGTIDDL FGASFAADIA SMRHETQYSR IFRS
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