| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0376 |
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| Symbol | |
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| ID | 4078609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 384690 |
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| End bp | 386501 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005671 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_612371 |
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| Protein GI | 99080217 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTCA ATGCAACACT CGCCGCCGTC ACTGACCGTA TCATCGAACG CAGCCGCCCC
ACGCGCGAGG CTTATCTGGC GCGGATGCGC GCCGCCGCCT CCAAAGGCCC GGCCCGCGCG
CATCTGAGTT GCTCCGGTCA GGCCCACGCC TATGCCGCCA CCGGCCCGGA TCAGGAGACA
CTGGCCACCG GTACAGGCGG GCACCTCGGC ATCGTCACCG CCTACAACGA CATGCTCTCG
GCGCATCAGC CGTTTGAAAC CTACCCCATG CTGATCCGTG AAGCGGTGCG CGAAGCGGGC
GGCACCGCGC AGGTGGCCGG TGGCGTGCCC GCCATGTGCG ATGGCATCAC GCAGGGCGAA
GCCGGCATGG AGCTGTCGCT CTTTTCGCGC GACAGTATTG CGATGTCCGT CGGCATCGCC
CTGTCGCACA ACGTCTTTGA CGCCACTGTG TTTCTGGGCG TTTGCGACAA GATCGTTCCC
GGCCTTGTGA TCGGCGCCCA GGCCTTTGGC CATTTGCCCG CCGTGTTTCT GCCCGCAGGA
CCGATGACCT CTGGTCTGTC AAACGACGAA AAAGCGCAGA TTCGCCAGAA GTTTGCCAAG
GGTGAGATCG GCCGGGACGA GCTACTCAAG GCCGAAATGG CCGCCTATCA CGGCCCCGGC
ACATGTACGT TCTACGGCAC CGCCAACACC AACCAGATGT TGATGGAGTT CATGGGGCTG
CACCTGCCCG GGTCGTCCTT TGTCAATCCC GGCACCGAGT TGCGCGACGC CCTCACCCGC
GAAGGCGCCA AACGCGCGCT GTCGCTCTCG GCGCTTGGCA ATCACTACAC GCCGACCTGC
GATATTCTTG ATGAAAAGGC CTTTGTGAAC GGCATGGTCG GGCTGATGGC GACCGGTGGT
TCTACCAACC TGCTGATCCA TCTTATTGCC ATGGCCCGCG CGGGCGGCAT CATCCTCGAC
TGGCAGGATT TCTCCGAGAT CTCCGATGTG GTGCCGCTGC TGGCGCGCGT CTATCCCAAC
GGGCTGGCGG ATGTGAACCA CTTCCACGCC GCTGGTGGGC TTGGATACAT GATCGGAGAA
CTCCTCGAGA ATGGCTATCT GCACCCCGAC ACAAAAACCG TAACCGGCGA GGGGCTTGGC
GCCTATCTGA TGGAGCCTTT CCTCGACGGT GGCGCGCTCA CATGGCGCAA GGGCACCACG
GAATCCCTGA ACGACAAGAT CGTGCGCCCT GCCTCGGATC CGTTCCAGAA GACCGGTGGC
CTTGCACGCC TGACCGGCAA CCTCGGCACC GGGGTGATGA AGATCTCTGC CGTAGCCGAA
GAACACCGCG TCGTTGAGGC ACCCGTGCGC GTTTTCCACG ACCAGGACGA GGCCAAGGCG
GCCTTCAAGG CGGGCGAGCT TGATGAAGGC GACGTTGTGA TCGTGGTCCG TTTCCAAGGC
CCCAAGGCCA ATGGCATGCC GGAGCTGCAC TCGATGACAC CCTTCCTGTC GATCATGCAG
GGGCGGGGCC AGAAGGTGGC GCTTGTGACC GATGGTCGGA TGTCGGGTGC CTCTGGCAAG
GTTCCCTCCG CGATCCATGT CGTCCCCGAG GCCCTCGATG GCGGCGCAAT CGCTAAGCTG
CAGGATGGCG ACATTGTGCG GGTGGATGCG ATCTCGGGCA ATCTCGAAGT CCTCACAGAA
GGCGTGCTAG ACCGCCCGGC GGCAACCGCC GATCTTACCT CTTATCAACA CGGCACTGGG
CGCGAGCTCT TTGCCCTGTT TCGCAGTTCC GTGACCTCTG CCGACACCGG CGCAACCGTA
TTTGGAGTTT GA
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| Protein sequence | MSLNATLAAV TDRIIERSRP TREAYLARMR AAASKGPARA HLSCSGQAHA YAATGPDQET
LATGTGGHLG IVTAYNDMLS AHQPFETYPM LIREAVREAG GTAQVAGGVP AMCDGITQGE
AGMELSLFSR DSIAMSVGIA LSHNVFDATV FLGVCDKIVP GLVIGAQAFG HLPAVFLPAG
PMTSGLSNDE KAQIRQKFAK GEIGRDELLK AEMAAYHGPG TCTFYGTANT NQMLMEFMGL
HLPGSSFVNP GTELRDALTR EGAKRALSLS ALGNHYTPTC DILDEKAFVN GMVGLMATGG
STNLLIHLIA MARAGGIILD WQDFSEISDV VPLLARVYPN GLADVNHFHA AGGLGYMIGE
LLENGYLHPD TKTVTGEGLG AYLMEPFLDG GALTWRKGTT ESLNDKIVRP ASDPFQKTGG
LARLTGNLGT GVMKISAVAE EHRVVEAPVR VFHDQDEAKA AFKAGELDEG DVVIVVRFQG
PKANGMPELH SMTPFLSIMQ GRGQKVALVT DGRMSGASGK VPSAIHVVPE ALDGGAIAKL
QDGDIVRVDA ISGNLEVLTE GVLDRPAATA DLTSYQHGTG RELFALFRSS VTSADTGATV
FGV
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