| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0367 |
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| Symbol | |
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| ID | 4077697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 376581 |
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| End bp | 377822 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005662 |
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| Product | ROK domain-containing protein |
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| Protein accession | YP_612362 |
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| Protein GI | 99080208 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCTC TTGCCTCAAA TGCAGGAGGA GCGCATAGAC CAGTCATGCC AGATCCACGC
CCCTACTCCA CCGGCGCAAG CCAGAGTGAG CTTCGTGCTT ACAATGAACG CCTGTTGCTC
ACGCTCTTGC ACCAAGGTGG CGCCCTACCC GGCAGTGAAA TGGCACGGCG CACCGGGCTG
TCGTCCCAGA CCGTCTCGGT GATCCTGCGC AAGCTCGAAC AGGACGGTCT GGTACTGCGC
GGCGAGAGCC AGAAAGGCCG CGTGGGCAAG CCTTCGGTCC CGATGGGCAT CAATCCCGAG
GGCCTGTTTT CCTTTGGTGT CAAGATTGGC CGGCGCAGTA CGGATTTGGT GCTCACAGAC
TTTCGAGGCG GGCTGCGCGC CGAGCGGCAA CTGCGATACG CCTATCCGCA ACCTGACGAT
GTATTTGAGT TTATCAAAAC CGGCATAGAA GACATCAGCG CCGATCTGAG TGCCGAGCAA
CAGGCGCGGA TCTGCGGCAT CGGCGTTGCG ACCCCCTTTG ATCTCTGGCG CTGGCATGCA
CAAGTCGGCG CCCCAAAGTC CAGCCTCACC GCATGGCGCG CGCTGGATCC GACGATCGAA
ATTGCCCGCT TCAGCCCCCT GCGGGTCTTT GTCATCAATG ATGCCACCGC AGCATGCCGA
GCCGAGCATA TGTTCGGCGC CAGCAGCCGT TGGCGCGACA GCATCTATTT CTTCATCGCG
GCCTTCATTG GCGGTGGCGT GGTGCTCAAT CACTCCGTCT ATGAAGGCGG CATGGGCAAT
GCGGGGGCTC TAGGGCCCCT GCCCTCGCAA CGGGCTGATG GCAGCAATTG CCGCCTGCTC
GACAGCGCGT CCATCCGCGA GCTCGAGCGG CTTCTGAATG AGGCCGATAT TGATCCACGC
GCGCTCTGGG AGCAACCGCA GGATTGGAGT GCCTTTGCCC CGCAGGTGGA TCAATGGCTC
GAAGAAACCG CCTGCGCCCT GGCGCGTGCA GCGCTGACCA CCTGCGCGGT CATTGATTTT
CAGGCTGTTG TGGTAGATGG GGTACTGCCA AGGTCCATCC GCCAACGCCT GGTCGATCGC
ATTCGCGAAG AGCTCCCCAA GCTGGATGCC CGCGGCCTGA TCCTACCCGA CGTCCAGGAG
GGCCAGATCG GCCCGCATGC CTCGGCCCTT GGAGCGGCCG CCAAACCCCT GATTGCGCAG
TATCTCCTTG ATACTCACGC CGGTTTCACT GCCACAAGCT GA
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| Protein sequence | MQALASNAGG AHRPVMPDPR PYSTGASQSE LRAYNERLLL TLLHQGGALP GSEMARRTGL
SSQTVSVILR KLEQDGLVLR GESQKGRVGK PSVPMGINPE GLFSFGVKIG RRSTDLVLTD
FRGGLRAERQ LRYAYPQPDD VFEFIKTGIE DISADLSAEQ QARICGIGVA TPFDLWRWHA
QVGAPKSSLT AWRALDPTIE IARFSPLRVF VINDATAACR AEHMFGASSR WRDSIYFFIA
AFIGGGVVLN HSVYEGGMGN AGALGPLPSQ RADGSNCRLL DSASIRELER LLNEADIDPR
ALWEQPQDWS AFAPQVDQWL EETACALARA ALTTCAVIDF QAVVVDGVLP RSIRQRLVDR
IREELPKLDA RGLILPDVQE GQIGPHASAL GAAAKPLIAQ YLLDTHAGFT ATS
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