| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0356 |
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| Symbol | |
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| ID | 4077686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 361863 |
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| End bp | 362840 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005651 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_612351 |
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| Protein GI | 99080197 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.547222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAA TGACGCTCAA GACCACTGTT GCCGGCGCTG CGCTGGTGCT TGCAGCCGGG
GTGGCTCAGG CCGAGAAATG GGACATGCCG ATGGCTTATG CGGCCTCGAA CTACCACTCC
GAGATGGGTG TGGTCTTTGC CGACAAGGTG CGCGATTACA CCGGCGGAGA GATCGACATC
ACCGTGCATC CGGGTGGTTC GCTCTTCAAG GGCGGCGAGA TCAAGCGCGC GGTGCAGACC
GGACAGGCCC CGATTGGCGA ACGTTTCATG TCGGCCCACG CCAATGAAGA GCCTCTCCTG
GGTTGGGACA ACCTGCCGTT TCTTGCCACC ACCTATGCCG AGAACGACAA GCTCTGGTCT
GTGGCCAAGG ACAAGGTGAA CGCGGCGCTT GCGGATCAGA ACCTGGTCAC GCTCTACACC
TGCCCATGGC CGGGTCAGGG GTTCTACTTC AACAAGGAAG TGACCTCCTC TGAGGACACG
CAAGGGGTGA AGTTCCGCTC CTATAACACC GCCACCGCGA CTTTTGCCGA AGAGCTCGGC
ATGATCCCGG TGCAGGTGGA AGCCGCCGAA TTGAGCCAGG CGCTTGCAAC AGGCGTGGCC
GAGGCATTCA TTTCCTCCGG CTCCACTGGC TATGACCGCA AGGTCTGGGA ACAGCTGAGC
CACTACTACA AAGTGAACGC CTGGCTACCA CGCAACTACG TGATGGTGAA CAAGCAGGTC
TGGGACGGGC TGAGTGCCGA AACCCAGGGC GCCATCCAGA AAGCCGCGGA TGAGACCGGC
GCTGCCTGCG CTGCGAAATC CGAAGAGCTG GCCAACTGGT ACTTCGAACA GCTCGAGGCC
AATGGCATGA CCGTGGCCGA CGCAGGCCCG GAGTTCCTTG CGGAGTTGCA GGCGATTGGC
GCCAAGATGA CAGACGACTG GCTGGCATCG GCGGGCGAGG ACGGTCAGGC GATCGTGGAC
GCTTTTAAGG CCAACTGA
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| Protein sequence | MTKMTLKTTV AGAALVLAAG VAQAEKWDMP MAYAASNYHS EMGVVFADKV RDYTGGEIDI
TVHPGGSLFK GGEIKRAVQT GQAPIGERFM SAHANEEPLL GWDNLPFLAT TYAENDKLWS
VAKDKVNAAL ADQNLVTLYT CPWPGQGFYF NKEVTSSEDT QGVKFRSYNT ATATFAEELG
MIPVQVEAAE LSQALATGVA EAFISSGSTG YDRKVWEQLS HYYKVNAWLP RNYVMVNKQV
WDGLSAETQG AIQKAADETG AACAAKSEEL ANWYFEQLEA NGMTVADAGP EFLAELQAIG
AKMTDDWLAS AGEDGQAIVD AFKAN
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