| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0354 |
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| Symbol | |
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| ID | 4077684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 359541 |
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| End bp | 360473 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005649 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_612349 |
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| Protein GI | 99080195 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCC GCTTTCGCCA GCTTCAGGCC TTTCACGCCA TCGTGGAGAC CGGCACCGTG
ACGGGTGCGG CGGGGCTCTT GGGGATTTCG CAGCCCGGCG TCTCCAACCT GTTGTCTCAA
CTTGAGGATC AGGCCGGGAT GGCTTTGTTC GAGCGGCTTC ACGGGCGGCT CCTGCCTACC
CCCGAAGCAG AGCTTCTCTT TGCCGAGGTC GACACAGTGA TGCGCGGGAT GAGCAAGGTC
ACGCAGACCA TGGTGGATCT CAAGACGCGC AAGCTCGGAC AGCTGCAGAT CGCCTCCCAG
CACGCGATGT CCTTTGGCTT TATGCCCCGG TTGATCGCAC GCTTTGCCTC AGATCGGCCC
GAGCTCAACA TCTCCTTTCA ATCACAATAT TCCAGCAAGG TGCAGGAATG GGTCTGGAAC
GGGCTGTTTG AGATCGGCGT CTGCGAGATG CCGCTCCTTT ACGACACGCT CACGGTTTAC
CCACTCTATG TGGAAACCAT GCTAGCGCTC CACAAGGACA ACCCACTGGC CCGTCATGAG
GTGCTCACCC CGGAGCTGCT GGCAGGCGAG CCCTTTATTG TGATGGGGCA GGACCACATG
ACCCACCGGC GTCTGCGCGA AGCCTTTCAG GACGCAGGCG TGCCATTGCG CACCCGCGTG
CATTCGCATC TGTTCAAGAA CCTTCTGAGC TTCGTGCAAG AAGGCATGGG CGTGGCGCTC
CTTGATCGGT TCATGTTCGA CTATGACATG CAGGGTGATG TCATCACGCG CCCGTTTCGC
CCGACAATTC GCATGGATAT GTGCGTGATC ACCTCAAAAT CGCGTCCCAT GTCACAATTG
GGCAAGGAGT TTCTTGACCT CCTCCTTGGT GAATTGCAGC ACTATTCGGT AGAGGGGCGG
CCCTTGGTGC CCGCAGAACG AAAACGGAGA TAG
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| Protein sequence | MKLRFRQLQA FHAIVETGTV TGAAGLLGIS QPGVSNLLSQ LEDQAGMALF ERLHGRLLPT
PEAELLFAEV DTVMRGMSKV TQTMVDLKTR KLGQLQIASQ HAMSFGFMPR LIARFASDRP
ELNISFQSQY SSKVQEWVWN GLFEIGVCEM PLLYDTLTVY PLYVETMLAL HKDNPLARHE
VLTPELLAGE PFIVMGQDHM THRRLREAFQ DAGVPLRTRV HSHLFKNLLS FVQEGMGVAL
LDRFMFDYDM QGDVITRPFR PTIRMDMCVI TSKSRPMSQL GKEFLDLLLG ELQHYSVEGR
PLVPAERKRR
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