| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0336 |
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| Symbol | |
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| ID | 4076037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 339939 |
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| End bp | 341264 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005631 |
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| Product | major facilitator transporter |
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| Protein accession | YP_612331 |
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| Protein GI | 99080177 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00900] H+ Antiporter protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCGA TTTTGGCAGA CCGCACCTAC CGACATCTTT TCCTCGCGCA GGTCGTCGCC
CTGTTGGGCA CGGGGCTGTC GACGGTCGCG CTTGGGCTAT TGGCCTATGA CCTGGCGGGC
AACAGCGCCG CGATGGTGCT CGGCACTGTC TTTACCCTGA AGATGGTCGC TTATGTGGGG
ATTGCGCCGG TGGCCGGGGC CTTTGCCGAC AGTGTGAACC GGCGCCAGTT GCTCGTGATC
CTCGATCTGG TTCGCGCCGG GGTTGCCATC GCCCTGCCCT TCGTGACCGA GATCTGGCAG
GTCTATGTGC TGATCTTCCT GCTGCAATCG GCCTCCGCCG CCTTTACGCC CACCTTTCAG
GCAACCCTTC CGGATGTGTT GCCCGAAGAG GAGCGCTACA CCCGCGCGCT GTCACTGTCG
CGTCTCGCCT ATGATCTCGA AAATATCATC AGCCCGACGC TGGCCGCGCT GCTGTTGACC
GTGATGGCCT ACAACACGCT GTTCCTCGGC ACGGCGATCG GGTTTCTGGG ATCTGCGCTG
CTTGTGGTCT CGGTGCTCCT GCCCAGCCCC AAGCCAAGCA CGCGGCGCGG GATCTATGCC
CGCACCACAC GCGGTATTCG GATCTACCTT GCCACGCCTC GGCTGCGCGG GCTCTTGTGC
CTGAACCTCG CGGTCGCATC TGCCGGAGCC ATGGTGCTGG TGAACTCGGT TGTGCTGATA
CGCGGAGAGC TTGGCCTCTC CGAGAGCGCG CTTGCCTGGA CCCTCTTTGC CTTCGGGGCC
GGGTCGATGC TGGCGTCTTT GGCGCTGCCG CGGGTGCTCG ACACGCTCAA GGACCGTCCG
GTGATGATCG CCGGGGCCAC CCTGATGGTG GGGGCGCTTC TTGGTCTTGC GGCTGTCATT
GCCCTTGCCG ATCTATCCTG GGCAGGCGTG CTGGTGGCGT GGTTTCTGGT TGGGATCGGC
TATTCAAGCA CACAAACGCC CTCGGGCCGT TTGCTGCGCC GCTCCGCCCA TGCCGAAGAC
CGCCCTGCAA TCTTTGCCGC GCAGTTCGCG CTATCCCACG CCTGCTGGCT GCTGACCTAT
CCGCTGTCAG GCTGGCTGAT GACGGGGCTT GGCCCATTGC CAGCACTGGT CGTGCTGGCA
GCCCTCTCCG GGCTCGGCAT CCTTGCCTGC CTGCGGCTCT GGCCCAAGAA CGCGCCCGAC
GTGATCCTCC ATGACCATGA GGACCTGCCG GCGGACCATC CCCACATGCG CCAATTTGGC
ACCACACCGC ATCAACACGC GATCATCATC GACGATCTGC ACCGTCACTG GCCAACGCAG
GGATAG
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| Protein sequence | MLSILADRTY RHLFLAQVVA LLGTGLSTVA LGLLAYDLAG NSAAMVLGTV FTLKMVAYVG
IAPVAGAFAD SVNRRQLLVI LDLVRAGVAI ALPFVTEIWQ VYVLIFLLQS ASAAFTPTFQ
ATLPDVLPEE ERYTRALSLS RLAYDLENII SPTLAALLLT VMAYNTLFLG TAIGFLGSAL
LVVSVLLPSP KPSTRRGIYA RTTRGIRIYL ATPRLRGLLC LNLAVASAGA MVLVNSVVLI
RGELGLSESA LAWTLFAFGA GSMLASLALP RVLDTLKDRP VMIAGATLMV GALLGLAAVI
ALADLSWAGV LVAWFLVGIG YSSTQTPSGR LLRRSAHAED RPAIFAAQFA LSHACWLLTY
PLSGWLMTGL GPLPALVVLA ALSGLGILAC LRLWPKNAPD VILHDHEDLP ADHPHMRQFG
TTPHQHAIII DDLHRHWPTQ G
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