| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0330 |
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| Symbol | |
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| ID | 4076226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 334809 |
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| End bp | 335477 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005625 |
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| Product | (Acyl-carrier protein) phosphodiesterase |
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| Protein accession | YP_612325 |
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| Protein GI | 99080171 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.234975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACTC TGTTGCGAAT TGATGCAAGC GCCCAGCTTG AAGAACGCTC CCTCACCCGT
CACCTGACCG ATGTGTTCAC CAAGGAATTC CTCGCCAAGG CCCCCGACAC TAAGGTCATT
ACCCGCGATG TCGGGCGTGA GCCGATCCCT GCGATCGACC ACAAATTCAT CCACGCCGCC
TTTACCCCAC CCGAGGACAG AGAGCCGTGG ATGGCCGAGC GTCTGGCGCT GTCGGATGAA
CTGGTCGATG AGGTGATCGC GGCCGACATT CTCGTGCTTG GCGCGCCGAT GTACAACTAC
GGTATGCCCA CCGCACTGAA GGGCTGGATC GACCATGTCG CGCGGATTGG CCGGACCTTT
TCCTTTGATC TGGCGCGTGG CGACACCCCG ATTGAGCCGA TCCTCTCGGG CAAACGGCTG
GTGGTGCTCT CCTCGCGCGG CGAGTTCGGC TTCGCGCCCG GGGGCGCGCG CGCGCATCTC
AATGCGCTTG ATCCGGCGCT GGCAGCCTGC GCGCATTACT TTGGCGTTGC GCAAGCCGAC
ATCGAAACAA TCGCGATCGA ATACCAGGAG TTCAAGGACG CGCGCCACGA GGCATCGGTA
GCCTCGGCTG AGACCCGCAC CCGCGCGCGC GCCGCAGATC TGGCCGGTGC AGCGGTAAAA
GCCGCCTGA
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| Protein sequence | MPTLLRIDAS AQLEERSLTR HLTDVFTKEF LAKAPDTKVI TRDVGREPIP AIDHKFIHAA
FTPPEDREPW MAERLALSDE LVDEVIAADI LVLGAPMYNY GMPTALKGWI DHVARIGRTF
SFDLARGDTP IEPILSGKRL VVLSSRGEFG FAPGGARAHL NALDPALAAC AHYFGVAQAD
IETIAIEYQE FKDARHEASV ASAETRTRAR AADLAGAAVK AA
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