| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0324 |
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| Symbol | |
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| ID | 4076220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 329049 |
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| End bp | 329936 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005619 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_612319 |
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| Protein GI | 99080165 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCTT ATTTTTCTCC GGCACCCGCC TCGGTGCGCC GGACCCCGTT TCTGTTTGGC
CGTTTCTGGC GGGCGCTCTG GGTGCTGCCG CTGCCGGTCT GGCTGCTGCT GTTTTTTGCG
GTGCCGCTAG GCCTGCTGGT GGCGATTTCC TTCTGGTCGG TGGTGAACTA CCGGCTCACA
CCTGACGCCA CGCTCTCGGC CTGGCGCTAT GTGCTGGGGC TCGAGTTCCT CTGGGCGAGC
TTCTGGCGCA GCTACGGCCT TGCCATGGCC AGCGCGGTCG CGATTTCGCT TTTGGCGTTT
CCGGCGTCCT ACGCGATGGC CTTTGTGGTG GCACCGCGGC AGCGGCTGAT CCTGCTGGGG
CTGGCGATTG CACCGTTTTT CACAAGCTAT CTGGTGCGGG TTTACTCCTG GCAGGTCTTC
CTGACCGAGG GCGGCGTGAT CCCGTCGATT GTGCAAGCCC TGGGTGGCAG CGGCGAGAGC
CTGCTCAACA CCTATTTCGC GCTGTTTCTG GGACATGCAA CCCTGGCGCT TCCGGTGGTG
CTGATCCTGC AGACCATCGC GCTTGTGAAT GTGGACCGGA CCGGGATTTC TGCGGCGGCA
AACCTTGGCG CACGTCCCGG AGCCATCCTG TTGCAGGTGA TCCTGCCCGC CGCCCGGCCC
GGACTCACGC TGGGGCTGCT GTTTGCGTTT CTGCTCTCCT ATGCCGAGTT CGTCAGCGCG
TCTTATCTCG GGGGCGGCAG CTTTCAGACC CTCCCGATCC TCGTGACGGA TCTGGTGCGG
GCAGGCCAGC AATGGCCACG CGCCGCCGTG GTGGCGCTGA TGATGATCGC AAGCCTTTTG
ATCACGGCCT TTGTCACCGT CCTCTGGGCG TACCGCGAGA AAGGATAA
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| Protein sequence | MTSYFSPAPA SVRRTPFLFG RFWRALWVLP LPVWLLLFFA VPLGLLVAIS FWSVVNYRLT
PDATLSAWRY VLGLEFLWAS FWRSYGLAMA SAVAISLLAF PASYAMAFVV APRQRLILLG
LAIAPFFTSY LVRVYSWQVF LTEGGVIPSI VQALGGSGES LLNTYFALFL GHATLALPVV
LILQTIALVN VDRTGISAAA NLGARPGAIL LQVILPAARP GLTLGLLFAF LLSYAEFVSA
SYLGGGSFQT LPILVTDLVR AGQQWPRAAV VALMMIASLL ITAFVTVLWA YREKG
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