| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0322 |
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| Symbol | |
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| ID | 4076218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 326868 |
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| End bp | 327740 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005617 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_612317 |
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| Protein GI | 99080163 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAC TCCCGCCGCT CAACGCAATT CGTGCCTTCG AGGCTGTCGC CAGACGGCTC
AGTTTTGCCG ATGCGGGCGA TGAACTCGGG GTGACGGCCA CCGCGATCAG CCACCAGATC
AGGCATCTTG AGGCCTATCT CGGGTTTCAA CTGATTGAGC GCCGCCCCCG CCAGATCGCC
CTCACCCCCG CAGGCCAGGA ATTGTTTCCC AAGCTGCAGA TGGCGTTCGA CACACTCGGA
GAAGCCTTTG CGATGCTCGA CAAGGATGTG GAGCAATCCC TGGTGCGGGT CACGGCCACC
TATGCCTTTG CCGAGCGTTG GCTGGTGCCG CGCCTGACGG GGTTTTTCGA GCAGCACCCC
GACATCCGCG TCGAGGTGGA GACGGATGAC GCCATCCTTG ATTTACGCGC AGATCGGCTG
GATTTGGCGA TCCGCTACGG GCCCCAGACC GCGGCAACGG AACACGCCGA AGTCCTGTTC
TCGGACCGTT TCATCCCCCT GCGGCTGGCC AGCCAGCCCG AGGCGGACCT GCAAGAAAGC
CGCCTGCTGG GATTTCGCTG GCGCAATGCG GATATGGGCG GGCCAGTCTG GGAAGATTGG
TTCAAGGCAG CCGGAGAGCC CTTCCCCGCC GAACGCATGA CCCGCTTCAG CGATGAAAGC
TCGGCCTTCA ATGCGCTGGA CCGAGGGTTG GGGCTGCTTT TGTCCAGCAG CGCGCTCGCC
GACGAAGGCC TGCAGTCGGG TCGCTACCAA CAGGTCCCCG GCCCCGAGCT TCACGGGTTT
GCCTTTTACC TCGTGCGCAA CCCGCTGTCG CGCAACAAAC AGGGTGTAAG GGTCTTCACC
GATTGGATCA GAGAGGCCGC CAAGGAGAGC TGA
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| Protein sequence | MRKLPPLNAI RAFEAVARRL SFADAGDELG VTATAISHQI RHLEAYLGFQ LIERRPRQIA
LTPAGQELFP KLQMAFDTLG EAFAMLDKDV EQSLVRVTAT YAFAERWLVP RLTGFFEQHP
DIRVEVETDD AILDLRADRL DLAIRYGPQT AATEHAEVLF SDRFIPLRLA SQPEADLQES
RLLGFRWRNA DMGGPVWEDW FKAAGEPFPA ERMTRFSDES SAFNALDRGL GLLLSSSALA
DEGLQSGRYQ QVPGPELHGF AFYLVRNPLS RNKQGVRVFT DWIREAAKES
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