| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0303 |
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| Symbol | |
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| ID | 4077126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 308867 |
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| End bp | 310279 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005597 |
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| Product | PepSY-associated TM helix |
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| Protein accession | YP_612298 |
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| Protein GI | 99080144 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.190066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCA GCCAAACCAC CGGCGTGGAC AGCCGTCCCG CCGCCCCGAA CCTGTCGCAG
AAATTCTACT TCGCCGCCTG GCGCTGGCAT TTCTACGCAG GGCTTTACGT TATTCCCTTT
CTGATCATGC TGGCCGTCAC CGGTCTGATG ATGATGTTCA TCACGCAGGT GGACGGTCGC
GACGGCGAGA CCCTGCGCGT CTCAGTCACG GGCGTCGAGA TGCCGATCGA GGCGCAGATG
CAGGCCGTCC TGGCCGCCCA GCCTGGCGCA ATTGTCGAAT GGATCGCCCC CAAGAGCGCC
GATCTCGCCA CCGTCTATCG CATTGCCCCG CCTCAGGGCG GAAACCGGAT GGTTGCTCTC
AACCAATACA CGGGCGAGGT GCTTGAGATC TGGGACCGGC GCGCCGGGTG GTACGACTGG
GCCGACAATA TGCATGGAAC TCTCCTGATC GGAGAGACGG GCGACCGCCT GATCGAGATC
GCAGCCGGGC TCGGGATTGT GCTGGTTGTC ACCGGGCTCT ACCTCTGGTG GCCGCGCGGC
AACTGGCGTG CAGCGCTGCT GCCGGATCTG CGCGCGCGGC GACGCGCCCT ATGGAAAAAC
CTCCACGGGG TGCTGGGCTT TTGGATGTCC GGCCTTCTGG TGGTGTTTCT CATTTCCGGT
CTGGCCTGGA CCGGCATCTG GGGTGAGAAA TTCGTGCAGG CCTGGTCCAG CTTTCCGGCG
CAGAAATGGG ACGCCGTGCC CACCTCGGAC AGCACCCATG CCGCGCATCT GAACCACGGC
AGCACCAATG ATGTCCCCTG GGCACTGGAA CAGACGCCGA TGCCCATGTC TGGCTCCACC
GCCGGAACAC AGGGGCTTGC ACCGGGCGAA GCGGTCTCGC TGGGGTCGGT GATTGCGCTT
GGGCGCGCGC TCGGGATGGA AGGCCGCTTC CGCGTCGCCC TCCCGCGCGA TGCCAATGGG
GTCTGGACCC TCAATCGCGA CAGCATGTCC GGGGACAGCA CGGACCCCTT TGTCGACCGC
ACGGTGCATG TCGACCAATA CACGGGCAAA ATCCTGGCGG ACGTGCGTTT TGACGATTAT
TCGCTGGCGG GCAAGGCCAT GGCGGTTGGC ATCCCCTTTC ACATGGGGCT CATGGGGCTG
TGGAACCTCG TTCTGAACAC GGTGTTTTGC CTGTCGATGA TCTTTGTCTG CATCTCGGGC
ATGGTGATGT GGCTCAAGCG CCGCCCCACG CGTGCCGCAC GTCTCGCGGC CCCGCCGATG
CCCGAGGATC TGCCGTTCTG GAAGGGTGCG GTGCTGATCG GGCTCTTTGC CTCATTGGCC
TTCCCGCTGG TGGGTCTGAC GCTCTTGGCG GTTCTGGCAC TGGATGTGCT GATCCTGTCG
AACCTGCCCC GCCTCAAGCG CGTGGTCAGC TGA
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| Protein sequence | MALSQTTGVD SRPAAPNLSQ KFYFAAWRWH FYAGLYVIPF LIMLAVTGLM MMFITQVDGR
DGETLRVSVT GVEMPIEAQM QAVLAAQPGA IVEWIAPKSA DLATVYRIAP PQGGNRMVAL
NQYTGEVLEI WDRRAGWYDW ADNMHGTLLI GETGDRLIEI AAGLGIVLVV TGLYLWWPRG
NWRAALLPDL RARRRALWKN LHGVLGFWMS GLLVVFLISG LAWTGIWGEK FVQAWSSFPA
QKWDAVPTSD STHAAHLNHG STNDVPWALE QTPMPMSGST AGTQGLAPGE AVSLGSVIAL
GRALGMEGRF RVALPRDANG VWTLNRDSMS GDSTDPFVDR TVHVDQYTGK ILADVRFDDY
SLAGKAMAVG IPFHMGLMGL WNLVLNTVFC LSMIFVCISG MVMWLKRRPT RAARLAAPPM
PEDLPFWKGA VLIGLFASLA FPLVGLTLLA VLALDVLILS NLPRLKRVVS
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