| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0275 |
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| Symbol | secY |
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| ID | 4077683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 281717 |
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| End bp | 283081 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005569 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_612270 |
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| Protein GI | 99080116 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0794912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.75706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATCAG CAGCAGAACA AATGGCGGCG AACACCAGCT GGGCAGCGCT CGGCAAGGCC
ACGGATCTGC GCAACCGCAT CCTGTTTACG ATTGGACTTT TGATTGTCTA TCGTTTGGGC
ACTTGGATTC CCGTTCCGGG GATCGACGCC GATGCATTGC GCCAGTTCAT GGACACCGCC
GGGCAAGGCA TTGGCGGCAT GGTGTCGATG TTTACTGGGG GCGCTTTGGG CCGCATGGGT
ATTTTTGCCC TCGGCATCAT GCCCTATATC TCGGCCTCCA TTATCGTGCA GTTGCTGACC
TCGATGGTGC CCGCGCTCGA ACAGCTCAAG AAAGAGGGCG AGCAGGGCCG CAAGAAGATC
AACCAATATA CCCGTTACGG CACCGTCCTG CTGGCAACCG CTCAGGCCTA TGGCCTCGCA
GCATCGCTGG AAGCCGGGGA TATGGCGTTT GATCCGGGTC TCTATTTCCG CCTGTCGTGC
ATGATCACGC TGGTGGGCGG CACCATGTTC CTGATGTGGC TGGGTGAGCA GATCACCAAC
CGCGGCATCG GCAACGGTAT CTCGCTGATC ATCTTCGTCG GCATCATCGC CGAAATCCCC
GCCGCCATTG TACAGTTCTT TGCCTCTGGC CGCTCTGGTG CGATTTCTCC GGCCGTGATC
ATTGCTGTGA TCGTGATGGT GGTTGCGGTG ATCATGTTTG TGGTCTTCAT GGAGCGTGCG
CTGCGCAAGA TCCACATTCA GTATCCGCGT CGCCAGGTGG GTATGAAAGT CTATGACGGC
GGCTCTTCGC ACCTGCCTGT CAAGGTCAAC CCGGCGGGCG TGATCCCTGC GATCTTTGCC
TCCTCGCTGC TCTTGCTGCC GACCACGATC TCCACCTTCA GCCAGGGCTC TGCTTCGAGC
CCGGTGATGA GCTGGCTCTT GGCCAACTTT GGCCCCGGTC AGCCGCTCTA TCTGCTGTTC
TTTACGGCGA TGATCGTGTT CTTTGCGTAT TTCTACACCT TCAACGTCTC CTTCAAGCCG
GATGACGTGG CGCAGAACCT GAAGAACCAG AACGGCTTTG TGCCCGGCAT CCGCCCCGGC
AAGAAGACCG CGGAATACAT CGAATATGTG GTGAACCGCG TCCTCGTCCT CGGCTCTGCC
TATCTCGCGC TGGTGTGCTT GCTGCCTGAG ATTTTGCGCA ACAATTTCGC AATTCCGGTT
TACTTTGGCG GCACCTCGGT TCTGATTGTG GTCTCTGTGA CCATGGACAC GATCCAGCAG
GTACAGAGCC ATCTTCTCGC GCATCAGTAC GAAGGCCTCA TTGAGAAGAG CCAGCTGCGC
GGTCGGAACA AGAAACGCAC CAAACGGGGA CCGTCTCGTC GATGA
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| Protein sequence | MVSAAEQMAA NTSWAALGKA TDLRNRILFT IGLLIVYRLG TWIPVPGIDA DALRQFMDTA
GQGIGGMVSM FTGGALGRMG IFALGIMPYI SASIIVQLLT SMVPALEQLK KEGEQGRKKI
NQYTRYGTVL LATAQAYGLA ASLEAGDMAF DPGLYFRLSC MITLVGGTMF LMWLGEQITN
RGIGNGISLI IFVGIIAEIP AAIVQFFASG RSGAISPAVI IAVIVMVVAV IMFVVFMERA
LRKIHIQYPR RQVGMKVYDG GSSHLPVKVN PAGVIPAIFA SSLLLLPTTI STFSQGSASS
PVMSWLLANF GPGQPLYLLF FTAMIVFFAY FYTFNVSFKP DDVAQNLKNQ NGFVPGIRPG
KKTAEYIEYV VNRVLVLGSA YLALVCLLPE ILRNNFAIPV YFGGTSVLIV VSVTMDTIQQ
VQSHLLAHQY EGLIEKSQLR GRNKKRTKRG PSRR
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