| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0270 |
|---|
| Symbol | rplR |
|---|
| ID | 4077678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 278848 |
|---|
| End bp | 279207 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 638005564 |
|---|
| Product | 50S ribosomal protein L18 |
|---|
| Protein accession | YP_612265 |
|---|
| Protein GI | 99080111 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0256] Ribosomal protein L18 |
|---|
| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0524919 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.432762 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACA GCAAACGTAC CCTGTTTCTG AAGCGTCGTC TGCGCGTCCG GAACAAGCTT
CGCAAGGTGA ACGCAGGTCG TCTGCGTCTC TCCGTGCACC GCTCGAACAA GAACATCTCT
GTTCAGCTGA TCGACGACGT CAAAGGTGTG ACTCTCGCCG CAGCCTCGAC CCTGGAAAAG
GATCTTGGTT TTGTGGGCAA GAACAACATC GAAGCGGCAA CCAAAGTGGG TTCCGTGATC
GCAGAGCGCG CGAAAGCGGC TGGCGTGACC GAAGCATACT TCGATCGTGG CGGTTTCCTC
TATCACGGCA AAGTGAAGGC TCTGGCCGAC GCTGCGCGTG AAGGTGGTCT GAAGATCTAA
|
|---|
| Protein sequence | MANSKRTLFL KRRLRVRNKL RKVNAGRLRL SVHRSNKNIS VQLIDDVKGV TLAAASTLEK
DLGFVGKNNI EAATKVGSVI AERAKAAGVT EAYFDRGGFL YHGKVKALAD AAREGGLKI
|
|---|
| |