| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0269 |
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| Symbol | rplF |
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| ID | 4077677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 278303 |
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| End bp | 278836 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005563 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_612264 |
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| Protein GI | 99080110 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0431444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.459215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGTA TTGGTAAAAA ACCGGTCGAA CTGCCCAGCG GTGTTTCCGC GAGCCTGTCC
GGCCAGACCA TCGAAGTGAA GGGCCCGAAA GGCGCCCAGA CCTTCACCGC AACCGACGAC
GTGACCCTCA CCGTTGAGGA CAACGTGGTG AAAGTTGAGC CGCGCGGCAA ATCCAAGCGC
GCGCGTCAGC AGTGGGGCAT GTCCCGCACC ATGGTGGCCA ACATGGTCCA GGGCGTCACC
CAGGGTTTCA AGAAAGAGCT TGAGATCCAA GGTGTTGGTT ACCGTGCTCA GATGCAGGGC
AACACCCTGA AGCTGAACCT CGGCTACAGC CACGACGTCG ATTTCACTGC CCCGGAAGGT
GTGACCATCA CCGCTCCGAA GCAGACCGAA ATCGTTGTGG AAGGTGCAGA CGCGCAGGCG
GTTGGCGAAG TGGCGGCGAA AATCCGCGAC TGGCGTCGTC CCGAGCCCTA CAAAGGCAAA
GGCATCCGCT ACAAGGGCGA ATTCATCTTC CGCAAGGAAG GCAAGAAGAA GTAA
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| Protein sequence | MSRIGKKPVE LPSGVSASLS GQTIEVKGPK GAQTFTATDD VTLTVEDNVV KVEPRGKSKR
ARQQWGMSRT MVANMVQGVT QGFKKELEIQ GVGYRAQMQG NTLKLNLGYS HDVDFTAPEG
VTITAPKQTE IVVEGADAQA VGEVAAKIRD WRRPEPYKGK GIRYKGEFIF RKEGKKK
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