| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0266 |
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| Symbol | rplE |
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| ID | 4077674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 276995 |
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| End bp | 277558 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005560 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_612261 |
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| Protein GI | 99080107 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0642331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.446671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGACG ATGCAACCTA CACCCCGCGT CTGAAGACCC TCTACAAGGA CACCATCCGT
GGCGCCCTCA AAGAGGAATT CGGCTACAAG AACGAGATGC AGATCCCCAA GCTGGACAAG
ATCGTTCTGA ACATCGGCTG CGGCCGTGCA GCCGTCAAAG ACAGCAAGAA GGCGAAATCG
GCTCAGGAAG ACCTGACCAA GATCGCCGGT CAGAAAGCGC TGACCACCGT TGCAAAGAAC
TCCATCGCTG GCTTCCGCGT TCGTGAAGGC ATGCCGATGG GTGCAAAGGT GACCCTGCGT
GGCGAGCGGA TGTATGAATT CCTCGACCGT CTGATCACCA TCGCGATGCC CCGGATCCGC
GACTTCCGCG GTGTGTCCGG CACCTCTTTC GACGGTCGTG GCAACTACGC CCTTGGCCTC
AAAGAGCACA TCGTGTTCCC GGAAATCGAT TTCGACAAGA TCGACGAAGC CTGGGGCATG
GACATCGTAA TTGCCACCAC CGCGAACACC GACGCGGAAG CTAAGGCGCT GTTGAAAGCT
TTCAACATGC CCTTCAACAG CTGA
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| Protein sequence | MLDDATYTPR LKTLYKDTIR GALKEEFGYK NEMQIPKLDK IVLNIGCGRA AVKDSKKAKS
AQEDLTKIAG QKALTTVAKN SIAGFRVREG MPMGAKVTLR GERMYEFLDR LITIAMPRIR
DFRGVSGTSF DGRGNYALGL KEHIVFPEID FDKIDEAWGM DIVIATTANT DAEAKALLKA
FNMPFNS
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