| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0264 |
|---|
| Symbol | rplN |
|---|
| ID | 4077672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 276322 |
|---|
| End bp | 276690 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 638005558 |
|---|
| Product | 50S ribosomal protein L14 |
|---|
| Protein accession | YP_612259 |
|---|
| Protein GI | 99080105 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0093] Ribosomal protein L14 |
|---|
| TIGRFAM ID | [TIGR01067] ribosomal protein L14, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.188398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.453731 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCAGA TGCAAACAAA TCTGGATGTT GCTGATAACT CCGGCGCTCG CCGAGTTCAG
TGCATCAAGG TTCTGGGTGG CTCCAAGCGT AAATACGCTT CCGTTGGCGA CATCATCGTC
GTCTCGGTTA AAGAAGCCAT CCCGCGCGGT CGCGTGAAGA AGGGTGACGT CCGTAAGGCC
GTTGTCGTTC GCACCGCCAA AGAGGTCCGT CGTGAAGACG GCACCGCCAT CCGTTTTGAC
CGCAACGCTG CTGTTATCCT GAATAACAAC AACGAGCCGG TCGGCACCCG TATCTTCGGC
CCGGTTGTTC GCGAACTGCG CGCGAAGAAC TTCATGAAGA TCATCTCGCT CGCTCCGGAG
GTGCTCTAA
|
|---|
| Protein sequence | MIQMQTNLDV ADNSGARRVQ CIKVLGGSKR KYASVGDIIV VSVKEAIPRG RVKKGDVRKA
VVVRTAKEVR REDGTAIRFD RNAAVILNNN NEPVGTRIFG PVVRELRAKN FMKIISLAPE
VL
|
|---|
| |