| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0258 |
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| Symbol | |
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| ID | 4077666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 272252 |
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| End bp | 272962 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005552 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_612253 |
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| Protein GI | 99080099 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTG TAACCAGTGT TGCCACCGTT TTTGCCCTTG GCTTTGCCGG GGCTGTGCAG
GCCGCCGATG TCACCTTGTT GACCGAAGAC TATGCGCCCC TCAACTTTGA GCGGGATGGC
CAGATCGTTG GCCTTGGCGC GGATCAGGTG TTTGAGATCA TGAGCCGGGC GGGCATCGCC
TATGAGGCGG AATTGACCCA GTGGTCCCGT GCGATTGGTC AGGCGGAACG CCGTCCCAAC
ACCTGCGTGT TCAGCACCAC GCATACCGAA GAGCGTGATC CCAAGTTCCA ATGGGTTGAG
CCGCTCGCCA GCGATAGCAC CATCCTCGTG CGTAAAGCTG GCAGTGACAT CGCCCCGGCA
ACCATCGAAG ACGCGCGCAG CTATCGCACC GGGACCCAGA CCGGCGACTA CACCGTCGGT
GTGCTCGAAG AAGCCGGTTT TGAATCTATC GATCTTGCGC CAACCCAATC GGCCACGGTG
AAAAAGCTGC TGCAGGGTCG GATTGACCTG ATGATCACCT CCGGCTCTTT CCTCGAGGCG
GCACTCGCCG ACGGAATCGA GATTGAAGAA GCGCTGGTGG TTTCCACAAC CACCATGTCG
CTGGCTTGCA GCCTCAAGAC CGACGAGGCG CTAATCGCGC GGATGCAGGA CGCACTGCAG
AGCATGATCG ACGACGGCAC TCAGGCCGAA ATCATCGCGC GTTACGAATA A
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| Protein sequence | MKFVTSVATV FALGFAGAVQ AADVTLLTED YAPLNFERDG QIVGLGADQV FEIMSRAGIA
YEAELTQWSR AIGQAERRPN TCVFSTTHTE ERDPKFQWVE PLASDSTILV RKAGSDIAPA
TIEDARSYRT GTQTGDYTVG VLEEAGFESI DLAPTQSATV KKLLQGRIDL MITSGSFLEA
ALADGIEIEE ALVVSTTTMS LACSLKTDEA LIARMQDALQ SMIDDGTQAE IIARYE
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