| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0254 |
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| Symbol | rplV |
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| ID | 4076014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 270063 |
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| End bp | 270443 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005548 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_612249 |
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| Protein GI | 99080095 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCAAGG ATAAAAACCC CCGCCGCGTG GCAGACAACG AAGCAATGGC AAAAGTCCGC
ATGCTTCGCA CCAGCCCGCA GAAACTGAAC CTGGTGGCTC AGATGATCCG TGGCAAGAAA
GTGGACAAGG CTCTGACCGA CCTCACTTTC TCCAACAAGC GGATCGCGCA GGACGTGAAG
AAATGCCTTC AGTCCGCCAT CGCGAACGCC GAAAACAACC ACAACCTTGA CGTCGATGAA
CTGATCGTCG CCGAGGCATG GGTCGGCAAG AACCTGACCA TGAAGCGCGG TCGCCCGCGG
GCCCGTGGTC GCTTCGGCAA GATCCTGAAG CCGTTCGCTG AGATCACCAT CAAGGTGCGT
CAAGTTGAGG AGCAAGCCTA A
|
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| Protein sequence | MGKDKNPRRV ADNEAMAKVR MLRTSPQKLN LVAQMIRGKK VDKALTDLTF SNKRIAQDVK
KCLQSAIANA ENNHNLDVDE LIVAEAWVGK NLTMKRGRPR ARGRFGKILK PFAEITIKVR
QVEEQA
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