Gene TM1040_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0252 
SymbolrplB 
ID4076012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp268935 
End bp269777 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content59% 
IMG OID638005546 
Product50S ribosomal protein L2 
Protein accessionYP_612247 
Protein GI99080093 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTTA AGTCGTATAA ACCGACGACG CCGGGCCAGC GTGGGCTGGT TCTGATCGAC 
CGTTCGGAGC TTTGGAAAGG GCGTCCGGTC AAGTCTCTCA CTGAGGGTTT GACCAAATCG
GGCGGCCGGA ACAACACCGG ACGGATCACT TCTCGCCGCC GTGGTGGTGG CGCAAAGCGT
CTTTACCGGA TCGTTGACTT CAAACGGAAT AAATTTGATG TCGCCGCGAC CGTCGAGCGC
ATTGAATATG ACCCCAACCG GACTGCCTTC ATCGCATTGG TGAAGTACGA AGACGGCGAG
CAGGCTTATA TCCTCGCGCC GCAGCGTCTG GCAGTTGGTG ACAAGGTCAT CGCCTCCGCA
AAGGCAGACA TCAAGCCGGG CAACGCAATG CCGTTCTCGG GCATGCCGAT CGGTACCATC
GTTCACAACA TCGAAATGAA GCCCGGCAAA GGCGGCCAGA TCGCCCGTGC AGCCGGTACT
TACGCTCAGT TCGTTGGTCG TGATGGTGGC TACGCTCAGA TCCGCTTGTC CTCGGGCGAA
CTGCGCTTGG TCCGTCAGGA ATGCATGGCC ACCGTTGGTG CCGTGTCCAA CCCCGACAAC
TCCAACCAGA ACTACGGTAA AGCCGGTCGC ATGCGCCACA AAGGCAAGCG TCCGAGCGTC
CGTGGTGTGG TTATGAACCC GATCGACCAC CCCCATGGTG GTGGTGAAGG TCGGACCTCC
GGTGGTCGTC ACCCGGTGAC CCCATGGGGT AAGCCGACCA AGGGTAAGCG CACCCGCAAC
ACCAACAAGG CGTCGCAGAA GCTGATCATC CGCTCGCGTC ACGCTAAGAA GAAAGGGCGC
TAA
 
Protein sequence
MALKSYKPTT PGQRGLVLID RSELWKGRPV KSLTEGLTKS GGRNNTGRIT SRRRGGGAKR 
LYRIVDFKRN KFDVAATVER IEYDPNRTAF IALVKYEDGE QAYILAPQRL AVGDKVIASA
KADIKPGNAM PFSGMPIGTI VHNIEMKPGK GGQIARAAGT YAQFVGRDGG YAQIRLSSGE
LRLVRQECMA TVGAVSNPDN SNQNYGKAGR MRHKGKRPSV RGVVMNPIDH PHGGGEGRTS
GGRHPVTPWG KPTKGKRTRN TNKASQKLII RSRHAKKKGR