Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0252 |
Symbol | rplB |
ID | 4076012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 268935 |
End bp | 269777 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638005546 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_612247 |
Protein GI | 99080093 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTTA AGTCGTATAA ACCGACGACG CCGGGCCAGC GTGGGCTGGT TCTGATCGAC CGTTCGGAGC TTTGGAAAGG GCGTCCGGTC AAGTCTCTCA CTGAGGGTTT GACCAAATCG GGCGGCCGGA ACAACACCGG ACGGATCACT TCTCGCCGCC GTGGTGGTGG CGCAAAGCGT CTTTACCGGA TCGTTGACTT CAAACGGAAT AAATTTGATG TCGCCGCGAC CGTCGAGCGC ATTGAATATG ACCCCAACCG GACTGCCTTC ATCGCATTGG TGAAGTACGA AGACGGCGAG CAGGCTTATA TCCTCGCGCC GCAGCGTCTG GCAGTTGGTG ACAAGGTCAT CGCCTCCGCA AAGGCAGACA TCAAGCCGGG CAACGCAATG CCGTTCTCGG GCATGCCGAT CGGTACCATC GTTCACAACA TCGAAATGAA GCCCGGCAAA GGCGGCCAGA TCGCCCGTGC AGCCGGTACT TACGCTCAGT TCGTTGGTCG TGATGGTGGC TACGCTCAGA TCCGCTTGTC CTCGGGCGAA CTGCGCTTGG TCCGTCAGGA ATGCATGGCC ACCGTTGGTG CCGTGTCCAA CCCCGACAAC TCCAACCAGA ACTACGGTAA AGCCGGTCGC ATGCGCCACA AAGGCAAGCG TCCGAGCGTC CGTGGTGTGG TTATGAACCC GATCGACCAC CCCCATGGTG GTGGTGAAGG TCGGACCTCC GGTGGTCGTC ACCCGGTGAC CCCATGGGGT AAGCCGACCA AGGGTAAGCG CACCCGCAAC ACCAACAAGG CGTCGCAGAA GCTGATCATC CGCTCGCGTC ACGCTAAGAA GAAAGGGCGC TAA
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Protein sequence | MALKSYKPTT PGQRGLVLID RSELWKGRPV KSLTEGLTKS GGRNNTGRIT SRRRGGGAKR LYRIVDFKRN KFDVAATVER IEYDPNRTAF IALVKYEDGE QAYILAPQRL AVGDKVIASA KADIKPGNAM PFSGMPIGTI VHNIEMKPGK GGQIARAAGT YAQFVGRDGG YAQIRLSSGE LRLVRQECMA TVGAVSNPDN SNQNYGKAGR MRHKGKRPSV RGVVMNPIDH PHGGGEGRTS GGRHPVTPWG KPTKGKRTRN TNKASQKLII RSRHAKKKGR
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