| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0239 |
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| Symbol | rpsL |
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| ID | 4075999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 259113 |
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| End bp | 259484 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005533 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_612234 |
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| Protein GI | 99080080 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.981172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAACGA TCCAACAGCT GATCCGCAAG CCGCGTCAGC CGAAAGTAAA ACGCTCCAAG
TCCATGCACC TGGAGCAGTG CCCGCAAAAG CGCGGCGTTT GTACTCGCGT CTACACCACC
ACACCGAAGA AACCGAACTC CGCTATGCGG AAAGTTGCCA AGGTCCGCCT GACCAACGGT
TTCGAAGTGA TCTCCTACAT CCCCGGTGAA TCCCACAACC TTCAGGAGCA CTCCGTGGTT
CTGATCCGTG GCGGCCGTGT AAAAGACCTT CCGGGTGTCC GTTACCACAT CCTGCGCGGT
GTTCTGGATA CCCAAGGTGT TAAAGACCGT AAGCAGCGTC GCTCCAAGTA CGGCGCGAAG
CGTCCTAAGT AA
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| Protein sequence | MPTIQQLIRK PRQPKVKRSK SMHLEQCPQK RGVCTRVYTT TPKKPNSAMR KVAKVRLTNG
FEVISYIPGE SHNLQEHSVV LIRGGRVKDL PGVRYHILRG VLDTQGVKDR KQRRSKYGAK
RPK
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