| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0232 |
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| Symbol | rplJ |
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| ID | 4076265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 246441 |
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| End bp | 246959 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005526 |
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| Product | 50S ribosomal protein L10 |
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| Protein accession | YP_612227 |
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| Protein GI | 99080073 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0244] Ribosomal protein L10 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0685965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAGAG CCCAGAAAGA GAAAGTGGTC GAGGAACTCG GCCAGATCTT CGAAAGCTCT
GGCGTGGTGG TCGTAGCCCA CTACACCGGT CTGACAGTAT CCGAGATGCA GGACCTTCGC
GCACGTGCTC GTGACGCGGG CGGCTCCGTG CGTGTTGCCA AAAACAGGCT CGCCAAAATC
GCCCTCGAGG GTAAGCCGTG TGAAAGCATG TCTGACCTGC TGACAGGGAT GACCGTTCTG
ACCTATTCCG AGGACCCCGT GGCAGCAGCC AAGGTGGCCG AGGACTTCGC CAAGGAGAAC
AAGAAGTTCG AAATCCTTGG CGGTGCAATG GGCGAGAACG CTCTGGACCG CGCAGGCGTT
GAAGCCGTGT CGAAGATGCC GTCCCGCGAG GAGCTCATTG CTTCCATCGT TGGCTGCATC
GGCGCACCGG CCTCCAATAT CGCCGGCGCA ATTGGCGCAC CTGCAAGCAA CATCGCAAGC
ATCCTTTCGA CCATCGAAGA GAAGGCGGAA GCTGCGTAA
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| Protein sequence | MDRAQKEKVV EELGQIFESS GVVVVAHYTG LTVSEMQDLR ARARDAGGSV RVAKNRLAKI
ALEGKPCESM SDLLTGMTVL TYSEDPVAAA KVAEDFAKEN KKFEILGGAM GENALDRAGV
EAVSKMPSRE ELIASIVGCI GAPASNIAGA IGAPASNIAS ILSTIEEKAE AA
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