| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0222 |
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| Symbol | trpA |
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| ID | 4076255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 237554 |
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| End bp | 238357 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005516 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_612217 |
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| Protein GI | 161899031 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.671513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCC CAACCACACG CATCGACGCT AAGTTTGCTG AACTCGCTGC CGCGGGCAAA
AAGGCCTTCG TCACCTATGT CATGGCGGGC GATCCCGACT ACGACACCTC TTTGGAGGTG
GTCAAAGGCC TGCCCGCCGC TGGCGTCGAT GTGATCGAGC TCGGCTTGCC CTTTACCGAT
CCGATGGCGG ACGGCGAAAC CATCCAGCTC GCAGGTCAGC GCGCGCTGGA GGCCGGAATG
ACGCTGGAGC GCACACTGCA GCTGGCGCGG GATTTTCGCA AGGAGGATGA CACCACGCCA
ATCGTGCTGA TGGGCTACTA CAACCCGATC TACTCGCGCG GTGTCGAGAC ATTCCTCAGC
GATGCAAAAG AGGCCGGCAT CGACGGTTTG ATCGTGGTGG ATCTGCCGCC AGAAGAAGAC
AGCGAACTCT GCCTGCCTGC ACAAGCGGCG GGGCTGAACT TCATTCGTCT TGCGACCCCC
ACCACCGATG ATGCTCGTCT GCCACGCGTG CTGCAAAACA CATCCGGTTT TGTCTACTAT
GTGTCGATCA CAGGGATCAC CGGCGCCGCC GAGGCAGAGG CCGCGGACGT CGGGCCCGAA
GTGGCTCGCA TCAAGGCGGC CACGGATCTG CCGATCATCG TGGGGTTCGG GATCAAAACG
CCGGAACGGG CGCAGACCAT CGCTTCGATC TCGGATGGGG CCGTCGTTGG CAGCGCCATC
GTGGCCGAGA TCGGAGCCGG GAAATCACCT GCCGAGGTGC TGGCCTTTGT AAAAACACTG
GCGGATGGCG CCCACGCGGG CTGA
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| Protein sequence | MTRPTTRIDA KFAELAAAGK KAFVTYVMAG DPDYDTSLEV VKGLPAAGVD VIELGLPFTD
PMADGETIQL AGQRALEAGM TLERTLQLAR DFRKEDDTTP IVLMGYYNPI YSRGVETFLS
DAKEAGIDGL IVVDLPPEED SELCLPAQAA GLNFIRLATP TTDDARLPRV LQNTSGFVYY
VSITGITGAA EAEAADVGPE VARIKAATDL PIIVGFGIKT PERAQTIASI SDGAVVGSAI
VAEIGAGKSP AEVLAFVKTL ADGAHAG
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