| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0219 |
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| Symbol | |
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| ID | 4076252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 234369 |
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| End bp | 235532 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005513 |
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| Product | L-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_612214 |
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| Protein GI | 99080060 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTGA TCACCAACAT CGAAGATCTC AAGCGTATTT ATGCGCGGCG TGTGCCAAAG
ATGTTTTATG ATTACGCGGA AAGCGGATCC TGGACCGAAC AGACCTTTCG CGAGAACAGC
ACGGACTTCG ACCAGATCCG GCTGCGGCAG CGGGTGGCGG TCGACATGGC GGGGCGCTCG
ACAGCCTCGC AGATGATCGG TCAGGATGTC GCCATGCCCG TGGCTCTGGC GCCGGTTGGG
CTGACGGGCA TGCAATGTGC GGATGGCGAA ATTAAAGCGG CCCGCGCAGC CGAAGCCTTT
GGCGTGCCCT TCACGCTCTC GACGATGTCG ATCAACTCGA TCGAAGAAGT CTCAGAAGCG
ACCAGTAAGC CCTTCTGGTT CCAGCTTTAT ACCATGAAGG ACGACGACTA CATCCGCCGC
CTGATCGCGC GTGCAAAGGA TGCAAATTGC TCGGCTCTGG TGATCACGCT CGACCTGCAG
ATCCTTGGCC AGCGCCACAA AGACCTGAAA AACGGCCTTT CTGCGCCGCC CAAGCTCACC
CCAAAAACCA TCGCAAATCT GATGACGAAA TGGGCCTGGG GCATCGAAAT GCTCGGCGCA
AAGCGACGCA ATTTCGGCAA TATCGTCGGC CACGTCGAGG GGGTCTCGGA TGCGTCCTCG
CTGGGGTCCT GGACGGCCGA GCAATTCGAC CCTTCGCTGG ATTGGGGCAA GATCGAAAAA
CTCAAGGAAA TGTGGGGTGG CAAAGTCATC CTCAAAGGTA TCCTGGATGA GGAAGACGCC
AAGATGGCGG CAAAGGTCGG CGCGGATGCG ATCACCGTCT CCAACCATGG TGGGCGGCAG
TTGGACGGGG CGCTCTCGTC GATTCGCATG CTGCCCCGGA TCATGGACGC GGTCGGCGAT
CAGGTGGAGG TTCACCTCGA CAGTGGCATC CGCTCCGGTC AGGACGTCCT GAAGGCGCTG
GCGCTTGGGG CGACCGGCAC CATGATTGGG CGAGCCTTTG TGTATGGGTT GGGCGCCATG
GGACAAAAGG GTGTGACCCG TGCCCTTGAG GTGATCCACA AGGAGCTCGA TACCTCCATG
GCGCTCTGTG GCGAGAAACA CGTTACCGAC CTTGGTCGCC ACAACCTCTT GGTGCCAGAG
GATTTCACCG GTCGCTGGGC CTGA
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| Protein sequence | MPVITNIEDL KRIYARRVPK MFYDYAESGS WTEQTFRENS TDFDQIRLRQ RVAVDMAGRS
TASQMIGQDV AMPVALAPVG LTGMQCADGE IKAARAAEAF GVPFTLSTMS INSIEEVSEA
TSKPFWFQLY TMKDDDYIRR LIARAKDANC SALVITLDLQ ILGQRHKDLK NGLSAPPKLT
PKTIANLMTK WAWGIEMLGA KRRNFGNIVG HVEGVSDASS LGSWTAEQFD PSLDWGKIEK
LKEMWGGKVI LKGILDEEDA KMAAKVGADA ITVSNHGGRQ LDGALSSIRM LPRIMDAVGD
QVEVHLDSGI RSGQDVLKAL ALGATGTMIG RAFVYGLGAM GQKGVTRALE VIHKELDTSM
ALCGEKHVTD LGRHNLLVPE DFTGRWA
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