| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0214 |
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| Symbol | |
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| ID | 4078662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 230182 |
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| End bp | 230928 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005508 |
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| Product | peptidyl-tRNA hydrolase |
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| Protein accession | YP_612209 |
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| Protein GI | 99080055 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCT TTGTAGGGCT TGGCAATCCG GGCGCAAAAT ACGCCGGAAA CCGACACAAT
ATCGGTTTCA TGGCGCTGGA TCAGATCGCT TCAGATCACG GGTTTTCCCC CTGGAAATCG
AAATTCCAGG CCCAAATGAG CGAAGGCACC CTGTCAGGTG AAAAAGTGAT CCTGCTTAAG
CCCCAGACCT TTATGAACAA CTCCGGCCAA TCCGTCGGCG AGGCGCTGCG TTTTTTCAAA
CTCACACCGG CGGATGTTGT GGTCTTTCAT GACGAACTTG ACCTCGCGCC GAGCAAATGC
CGCGTGAAAA ACGGCGGCGG CCATGCAGGT CACAACGGGT TGCGCTCGAT CCATGCCCAT
ATTGGTGCCG ACTACGGCCG GGTGCGCCTC GGGGTGGGCC ACCCCGGACA CAAGGATGCA
GTTGCCGGCT ACGTTCTGCG GGACTTCCCC AAAGCGGATC AGGGCTGGCT AGATGATCTG
ATGCGCGGGC TATCGGATGG GGCGGCCGCG CTGGCCACGG GCGACAGCGG GCGGTTCATG
AACGCGGTCG CATTGCGGGT CGCGCCACCG CGCAGCTCTA CCGGTGAGGC CTCCAAAGGG
CGCAAGAAAG CACAGAAGTC CGAGCCGGGG GTCGCAAAAA CGCCAGCCAA GGCCGCGACG
CCCGAAGCCC CCGCCGCGGG CGACATTCCC GCAGCGCCCG AGGACAGCCG TAGCCCGATG
CAAAAGCTGC TCGACAAGTT CAAATAG
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| Protein sequence | MKLFVGLGNP GAKYAGNRHN IGFMALDQIA SDHGFSPWKS KFQAQMSEGT LSGEKVILLK
PQTFMNNSGQ SVGEALRFFK LTPADVVVFH DELDLAPSKC RVKNGGGHAG HNGLRSIHAH
IGADYGRVRL GVGHPGHKDA VAGYVLRDFP KADQGWLDDL MRGLSDGAAA LATGDSGRFM
NAVALRVAPP RSSTGEASKG RKKAQKSEPG VAKTPAKAAT PEAPAAGDIP AAPEDSRSPM
QKLLDKFK
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