| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0199 |
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| Symbol | |
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| ID | 4078647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 216374 |
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| End bp | 217726 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005493 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_612194 |
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| Protein GI | 99080040 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCC ACGGCACGCC CATCCCGATG ACCTCCCGCC GCGCAAGCCC CCTCAAAGGC
GAGGCGCATG TCCCTGGCGA CAAGTCGATT TCGCATCGCT CATTGATCCT TGGCGCAATG
GCTGTGGGTG AGACAAAAAT CTCCGGCCTC CTTGAGGGCG AAGATGTGCT CGACACCGCC
AAGGCGATGC AGGCTTTTGG GGCCGAGGTC GTCAATCACG GCGGTGGAGA ATGGTCCGTC
TTTGGCGTGG GCGTCGGCGG TTTTGCCGAG CCGGAAAACG TGATTGACTG CGGCAATTCC
GGCACTGGTG TGCGGCTCAT CATGGGCGCG ATGGCGACCT CGCCGATCAC CGCGACCTTT
ACCGGCGATG CCTCGCTCAA CAAACGCCCG ATGGCGCGTG TGACCGATCC GCTTGCGCTC
TTTGGCGCGC AATCCGTGGG CCGCGAGGGC GGCCGTCTGC CGATGACCAT CGTTGGCGCG
GCCGAGCCCG TGCCGGTGCG CTATGAGGTG CCGGTGCCCT CAGCGCAGGT GAAATCTGCC
GTTCTGCTTG CAGGCCTCAA TGCGCCCGGC AAAACCGTTG TGATTGAGCG CGAAGCCACC
CGCGACCATT CCGAGCGGAT GCTTGCGGGC TTTGGGGCTG AAATCACGGT TGAGGACACC
AAGGAAGGCC GCGTGATTAC CCTCACCGGT CAGCCTGAGC TGAAACCGCA AGTGATTGCA
GTACCGCGCG ATCCCTCCTC TGCCGCCTTC CCGGTTTGCG CCGCGCTCAT CACGCCCGGT
TCTGACGTGC TGGTGCCGGG GATTGGTCTC AACCCGACCC GCGCGGGCCT GTTCTACACC
CTGCAAGACA TGGGCGCGGA TCTGACGTTT GAGAATCCTC GGACCGAAGG CGGCGAACCT
GTGGCCGATC TGCGCGCCAA ATACTCGCCC GACATGAAAG GGATCGAGGT CCCACCAGAA
CGCGCCGCGT CGATGATTGA CGAGTATCCC GTTCTGTCTG TGGTGGCCTC TTTTGCCACC
GGAACCACCA TGATGGCTGG CGTCAAGGAA TTGCGCGTGA AGGAAAGCGA CCGCATCGAT
GCAATGGCAA AGGGCCTGCG CGCCAATGGT GTCACCGTCG AGGAAGGCGA GGACTGGTGG
AGCGTCGAAG GCTGCGGCCC CGAGGGTGTC AAAGGCGGTG GCACTGCCGA GAGCTTCCTT
GATCACCGCA TCGCCATGTC GTTCATGGTG ATGGGTATGG GCGCACAAAA CCCGGTCTCC
GTCGACGATG GCAGCCCGAT CGCGACGTCC TTTCCCATCT TCGAGCGGCT GATGGGCGAT
CTTGGGGCGT CGATCATCCG CACGGATGGC TGA
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| Protein sequence | MSGHGTPIPM TSRRASPLKG EAHVPGDKSI SHRSLILGAM AVGETKISGL LEGEDVLDTA
KAMQAFGAEV VNHGGGEWSV FGVGVGGFAE PENVIDCGNS GTGVRLIMGA MATSPITATF
TGDASLNKRP MARVTDPLAL FGAQSVGREG GRLPMTIVGA AEPVPVRYEV PVPSAQVKSA
VLLAGLNAPG KTVVIEREAT RDHSERMLAG FGAEITVEDT KEGRVITLTG QPELKPQVIA
VPRDPSSAAF PVCAALITPG SDVLVPGIGL NPTRAGLFYT LQDMGADLTF ENPRTEGGEP
VADLRAKYSP DMKGIEVPPE RAASMIDEYP VLSVVASFAT GTTMMAGVKE LRVKESDRID
AMAKGLRANG VTVEEGEDWW SVEGCGPEGV KGGGTAESFL DHRIAMSFMV MGMGAQNPVS
VDDGSPIATS FPIFERLMGD LGASIIRTDG
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