Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0188 |
Symbol | |
ID | 4078420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 206670 |
End bp | 207686 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638005482 |
Product | PhoH-like protein |
Protein accession | YP_612183 |
Protein GI | 99080029 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCACCA GTGTTCTGCC CCCGTCCTCC GAGCACGCCC AGCCACCCGA AGTGCTGCTG GAATTTCCTG ACAATCGACT GCTGATAGAG CTTTGTGGCG AATTCGACCG CAATCTTGCG GAGATCGAGC AGCGCCTGGG CGTTCAGATC GTGCGACGTG GCAATCAATT GATCGTACAT GGCGATGCCG ACATGCGTCA GCAGGCCGGA GAGTTGTTGC AGGTGCTTTA CGAGCGCCTC GAGAGCGGCC GTCCCGTGGA GCGTGAGGAC ATCGATCGCG AAATCCGTCT GGATCGTTCG GATGAAGATG GCGGCGCCGG TCCCGATAGC CAATTGGAGA TGTTTTCCGG CGGCAAGGTC GAGATCAAGA CACGCAAAAA GCTGGTGGAG CCGCGCACCG ATGCGCAGAA GGTCTATGTG AAGAACCTCT TTGAGCATGA GATGGCCTTT GGCATCGGAC CTGCGGGCAC CGGCAAGACC TACCTGGCCG TGGCGGTGGG CGTGTCGATG TTCATTCAGG GGCATGTGGA CAAGATCATC CTGTGTCGTC CAGCGGTTGA GGCGGGTGAG CGTCTCGGGT TCCTGCCGGG CACGCAGGAG GAAAAAGTCG ATCCCTACAT GCAGCCGCTC TATGATGCGC TGAACGACTT TCTGCCGGGC AAGCAATTGG CAAAGCTGAA GGAAGAAAAG ACCATCGAGA TCGCGCCGCT GGCCTTCATG CGCGGGCGCA CCCTGTCCAA TGCCTTTGTG GTGCTGGATG AGGCACAAAA CGCCACCACC ATGCAGATGA AGATGTTCCT GACCCGTCTG GGCGAGGGAT CACGTATGGT GATTACGGGG GACCGTTCGC AGGTTGACCT GCCACGCGGG GTGCAGTCGG GGCTTCAGGA TGCGGAGCGC CTGCTCTCGC CGATCCCCAA GATCTCGTTC AATTATTTTA CCGCCAAGGA CGTGGTACGC CATCCGCTGG TCGCGGCCAT CATCGAAGCC TACGACAAGG ACGAAAACTC CGCCTGA
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Protein sequence | MATSVLPPSS EHAQPPEVLL EFPDNRLLIE LCGEFDRNLA EIEQRLGVQI VRRGNQLIVH GDADMRQQAG ELLQVLYERL ESGRPVERED IDREIRLDRS DEDGGAGPDS QLEMFSGGKV EIKTRKKLVE PRTDAQKVYV KNLFEHEMAF GIGPAGTGKT YLAVAVGVSM FIQGHVDKII LCRPAVEAGE RLGFLPGTQE EKVDPYMQPL YDALNDFLPG KQLAKLKEEK TIEIAPLAFM RGRTLSNAFV VLDEAQNATT MQMKMFLTRL GEGSRMVITG DRSQVDLPRG VQSGLQDAER LLSPIPKISF NYFTAKDVVR HPLVAAIIEA YDKDENSA
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