Gene TM1040_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0187 
Symbol 
ID4078419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp206149 
End bp206454 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content60% 
IMG OID638005481 
Productputative lipoprotein 
Protein accessionYP_612182 
Protein GI99080028 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA CCAAGGCAAT TGCCATCTTG ATGCTTGGCC TTTCGCTTGC CGCCTGTAGT 
GACAATGGCG ACAAAACGCG TGACCGGAAC TTCTTTGACG GTGGCGATGG GGATCTGGCC
GGCCTGGTAG CCGGGATCTG GGTTGACCCG CAAGGGTGTG AACACTGGAT CGTGGATGAC
GGGGTCGAGG GGTATCTTGA TCCGCGGCGC ACGCCCGATG GCCGCCCGGT GTGCAACAGC
GATCTGCCGC GCAATACGGC TTCCGGTCCG TTCAAAAGCG GCTCGAGGTT TGCAGACCCC
ATCTGA
 
Protein sequence
MKTTKAIAIL MLGLSLAACS DNGDKTRDRN FFDGGDGDLA GLVAGIWVDP QGCEHWIVDD 
GVEGYLDPRR TPDGRPVCNS DLPRNTASGP FKSGSRFADP I