| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0185 |
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| Symbol | |
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| ID | 4078417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 203892 |
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| End bp | 205214 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005479 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_612180 |
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| Protein GI | 99080026 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGC CCAAGAAACT CTATATCAAG ACCTACGGCT GTCAGATGAA CGTCTATGAC
AGCGAACGCA TGGCCGAGAC TTTGGGCGGG CAGGGGTATG TGGAGACACA GACGCCTGAT
GATGCGGATA TGATCCTGCT CAATACATGC CACATCCGCG AGAAGGCTGC GGAAAAGGTC
TATTCCGAAC TTGGGCGCTT CAAAGGGCTG AAGGCCGAAA AACCTGATCT CAAGATCGGC
GTGGCGGGTT GCGTCGCCCA GGCCGAGGGT GAGGAAATCA TGCGCCGCCA GCCCCTGGTG
GATCTCGTGG TCGGCCCGCA AAGCTACCAC CGTCTGCCGG AAATGGAGGC CAAGGCCGGC
ACCGGGGAGA AGGTGCTCGA CACCGATTTC CCCGAGGAAG ACAAATTTGA AAAGCTGAAG
CGCCGCCCCA AGGCCAAGCG TGGACCCACC GCGTTTTTGA CTGTGCAGGA AGGCTGCGAC
AAATTCTGCG CCTTCTGTGT TGTGCCCTAT ACTCGCGGTG CAGAGGTGTC GCGTCCGGTG
GATCGCGTGT TGCGCGAGGC AGAGGATCTG GTCGAGCGCG GCGTGCGCGA GATCACTTTG
TTGGGCCAGA ACGTCAATGC CTATCACGGC GCTGGGCCCA ACGGAGACAT GACACTGGCC
CAGTTGATCT GGGAGCTCGA CAAGATCGAC GGGTTGGAGC GGATCCGGTT TACCACCTCG
CACCCCAATG ACATGATGGA CGATCTCATC GAGGCGCATG GCACGTGCAA GAAGCTGATG
CCCTATCTGC ATCTGCCGGT GCAGGCCGGA TCAGACAAGA TCCTGAAACG GATGAACCGC
AGCCACACCG CCGAAAGCTA TATTCGCCTG ATCGAGCGCA TCCGCGCGGC GCGTCCGGAC
ATTTTGATCT CGGGCGATTT TATTGTCGGT TTCCCGGAAG AGACCGAAGA GGATTTCCAG
GCCACGCTCG ATCTGGTGGA AGAAGTGAAA TACGGGACCG CCTATTCCTT CAAATATTCC
ACCCGCCCGG GCACCCCTGC GGCGGAGCGT GCGCAAGTCG ATCCCAAAGA AGCGGATGAC
CGGTTGCAGC GTCTGCAGGC CGTGCTGACG CGTCAGCAGA GGGAGGTGCA GGACAGCATG
GTGGGACGCG AACTGGGCGT GTTGTTTGAA AAGGCCGGGC GCTTTGCGGG GCAGATGGTC
GGCAAGTCTG ATTATCTGCA TGCCGTTCAT GTGGCCGATT GTGACGCCAA GATCGGTGAT
CTGCGCCGCG TGCGGATCGT CTCTTCCGGG GCGAACTCGC TGGCAGGTGA ACTGATCGAC
TGA
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| Protein sequence | MSAPKKLYIK TYGCQMNVYD SERMAETLGG QGYVETQTPD DADMILLNTC HIREKAAEKV
YSELGRFKGL KAEKPDLKIG VAGCVAQAEG EEIMRRQPLV DLVVGPQSYH RLPEMEAKAG
TGEKVLDTDF PEEDKFEKLK RRPKAKRGPT AFLTVQEGCD KFCAFCVVPY TRGAEVSRPV
DRVLREAEDL VERGVREITL LGQNVNAYHG AGPNGDMTLA QLIWELDKID GLERIRFTTS
HPNDMMDDLI EAHGTCKKLM PYLHLPVQAG SDKILKRMNR SHTAESYIRL IERIRAARPD
ILISGDFIVG FPEETEEDFQ ATLDLVEEVK YGTAYSFKYS TRPGTPAAER AQVDPKEADD
RLQRLQAVLT RQQREVQDSM VGRELGVLFE KAGRFAGQMV GKSDYLHAVH VADCDAKIGD
LRRVRIVSSG ANSLAGELID
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