Gene TM1040_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0182 
Symbol 
ID4078414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp201548 
End bp202057 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content59% 
IMG OID638005476 
Product3-hydroxydecanoyl-(acyl carrier protein) dehydratase 
Protein accessionYP_612177 
Protein GI99080023 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAAT ACCCCAACAG CTTTGACAAA GAAGACCTGC TTAAATGCGC AAGAGGCGAG 
CTGTTTGGAC CCGGCAACGC ACAATTGCCT GCTCCGCCGA TGCTGATGAT GGACCGCATC
ACCGAGGTGA GCGCGGATGG GGGCGAGCAT GGCAAAGGCC ATATCCTCGC CGAATTCGAC
ATCACCCCGG ACCTGTGGTT CTTTGACTGT CACTTCCCCG GCAACCCGAT CATGCCCGGC
TGTCTCGGAC TCGATGGTCT GTGGCAGCTC ACGGGCTTTA ACCTTGGCTG GCGCGGCTGG
CAGGGACGCG GCTACGCGCT TGGCGTTGGG GAGGTCAAAT TGACCGGCAT GGTGCGACCG
GATCGCAAAA TGCTGACCTA TCGCGTCGAT TTCACCAAGG CAATCCAGAC CCGCCGCTTG
ACCATGGGCG TCGCAGACGG GATCGTGGAA GCCGATGGAG AAGTGATCTA TCAGGTTAAG
GACATGAAGG TGGCTCTGTC CGAGAGCTGA
 
Protein sequence
MAQYPNSFDK EDLLKCARGE LFGPGNAQLP APPMLMMDRI TEVSADGGEH GKGHILAEFD 
ITPDLWFFDC HFPGNPIMPG CLGLDGLWQL TGFNLGWRGW QGRGYALGVG EVKLTGMVRP
DRKMLTYRVD FTKAIQTRRL TMGVADGIVE ADGEVIYQVK DMKVALSES