Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0182 |
Symbol | |
ID | 4078414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 201548 |
End bp | 202057 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638005476 |
Product | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase |
Protein accession | YP_612177 |
Protein GI | 99080023 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCAAT ACCCCAACAG CTTTGACAAA GAAGACCTGC TTAAATGCGC AAGAGGCGAG CTGTTTGGAC CCGGCAACGC ACAATTGCCT GCTCCGCCGA TGCTGATGAT GGACCGCATC ACCGAGGTGA GCGCGGATGG GGGCGAGCAT GGCAAAGGCC ATATCCTCGC CGAATTCGAC ATCACCCCGG ACCTGTGGTT CTTTGACTGT CACTTCCCCG GCAACCCGAT CATGCCCGGC TGTCTCGGAC TCGATGGTCT GTGGCAGCTC ACGGGCTTTA ACCTTGGCTG GCGCGGCTGG CAGGGACGCG GCTACGCGCT TGGCGTTGGG GAGGTCAAAT TGACCGGCAT GGTGCGACCG GATCGCAAAA TGCTGACCTA TCGCGTCGAT TTCACCAAGG CAATCCAGAC CCGCCGCTTG ACCATGGGCG TCGCAGACGG GATCGTGGAA GCCGATGGAG AAGTGATCTA TCAGGTTAAG GACATGAAGG TGGCTCTGTC CGAGAGCTGA
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Protein sequence | MAQYPNSFDK EDLLKCARGE LFGPGNAQLP APPMLMMDRI TEVSADGGEH GKGHILAEFD ITPDLWFFDC HFPGNPIMPG CLGLDGLWQL TGFNLGWRGW QGRGYALGVG EVKLTGMVRP DRKMLTYRVD FTKAIQTRRL TMGVADGIVE ADGEVIYQVK DMKVALSES
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