| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0174 |
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| Symbol | |
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| ID | 4078782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 192195 |
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| End bp | 192584 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005468 |
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| Product | IS4 family transposase |
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| Protein accession | YP_612169 |
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| Protein GI | 99080015 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3293] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA AGTTGCATGC CATCTGCGAC AGTCGGGGAC GTCCACTCAA CCTGTTCGTC
ACCGCCGGTC AGGTCAGCGA CTACAACGGT GCACGAGCAT TGCTGAGCAG CCTACCGGAT
GTCGAGTGGC TACTCGGGGA CCGCGGATAT GATGCCGACT GGTTCCGGGA AGCGTTGAAC
GACAAAGGGA TACGCGCCTG CATCCCTGGA CGGAAGCAAC GGAAGAAACC GGTAAAGTAC
GACAAGCGCC GCTACAGGAG GCGCAACCGG ATCGAGATCA TGTTCGGCAG GTTGAAGGAT
TGGCGGCGTA TCGCAACGCG ATACGACAGA TGCCCAAAGG TCTTCCTGTC AGCCATCGCC
CTCGCAGCAC TCGTCATTTA CTGGCTATGA
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| Protein sequence | MTTKLHAICD SRGRPLNLFV TAGQVSDYNG ARALLSSLPD VEWLLGDRGY DADWFREALN
DKGIRACIPG RKQRKKPVKY DKRRYRRRNR IEIMFGRLKD WRRIATRYDR CPKVFLSAIA
LAALVIYWL
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