| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0165 |
|---|
| Symbol | |
|---|
| ID | 4078773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 181645 |
|---|
| End bp | 181989 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 638005459 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_612160 |
|---|
| Protein GI | 99080006 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0718] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00103] DNA-binding protein, YbaB/EbfC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAG GCCTTTCCGG CCTCGGCGAT ATGGCCGGGA TGATGAAAAA AGCCCAAGAG
ATGCAGTCCA AAATGGGCGA AATGCAGGAA GAGCTGCACA ATATCATGGT TGTCGGCGAA
GCCGGTGCCG GGCTGGTCAA GGCGACCGCG AGCGCAAAGG GCGATCTGAA GTCGCTGGAT
ATCGACCCGT CGATCTTCAA CGGGGATGAC AAGGAAGTGG TCGAAGATCT GATCCTCGCC
GCCGTCAAGG ACGCGCAGAC CAAAGCGGCC GAGCGTGCGC AGGACGAAAT GACCAAACTC
ACCGAAGGTC TGGGCCTTCC CAAGGACATG AAACTGCCGT TCTGA
|
|---|
| Protein sequence | MFKGLSGLGD MAGMMKKAQE MQSKMGEMQE ELHNIMVVGE AGAGLVKATA SAKGDLKSLD
IDPSIFNGDD KEVVEDLILA AVKDAQTKAA ERAQDEMTKL TEGLGLPKDM KLPF
|
|---|
| |