| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0148 |
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| Symbol | |
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| ID | 4078815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 162286 |
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| End bp | 163173 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005442 |
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| Product | hypothetical protein |
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| Protein accession | YP_612143 |
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| Protein GI | 99079989 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0292713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAAC TCATGGCTAA GAACGATACC AGAATGGGCA TTCTACTGAT GATCGGCGCG
ACGATCATTT TTGCCCTGCA AGACGGGATC TCGCGCCACC TGGCCAGCGA GTACAACGTC
TTTATGGTCA TCACCATCCG CTACTGGTTC TTTGCGGCCT TTGTGATCAC GCTGGCGCTG
CGCCAGACCG GGAGCATCCG CGCGGCAGCG CAGACCAGCC AGAGGTGGGT GCAGATCTTT
CGTGCCTTCG TACTGGTCGC GGAGATATGC GTGATGGTGC TGGCCTTTAC GGTGCTCGGT
CTTGTGGAGA GCCATGCGGT GTTCGTCTGT TACCCGCTTC TGATTGCCGC GCTGTCTGGT
CCCATCCTGG GCGAGCAGGT GGGCTGGCGG CGCTGGGCAG CGATCGGTGT GGGCTTCATC
GGGGTTCTGA TTATCCTGCA ACCGGGCTCT GGCGTGTTCC AGATTGCCGC GCTTATTCCG
CTTTTGGCGG CCTTGATGTT TGCCCTTTAT GGCTTGCTCA CCCGCTATGT GGCGCGCCGG
GACACCACTG CGACAAGCTT CTTTTACACG GGCGTCTACG GCATGCTTTT TGTAACGCCC
CTGGGGGTGT GGTGGTGGGA GCCGATGACG GCTGCGGACT GGGGCTGGAT GGCGACACTC
TGTGTGACCG GAGCGCTCGG GCACTGGCTC TTGATCAAAT GTTACGAGAT GGCCGAAGCC
AGCGCTGTGC AGCCCTTTGC GTACATGCAG CTCCCTTGGG CTGCGATGAT CGGGCTGTTG
GTCTTTGGCG AGGATATGCG CACCAATGTG ATCATCGGTG CTGCCATCGT CGTCGCCGCA
GGTCTATTCA CCTTTTGGCG CGAAAGCCTG AAGCGTGCGG CCCGATAG
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| Protein sequence | MDQLMAKNDT RMGILLMIGA TIIFALQDGI SRHLASEYNV FMVITIRYWF FAAFVITLAL
RQTGSIRAAA QTSQRWVQIF RAFVLVAEIC VMVLAFTVLG LVESHAVFVC YPLLIAALSG
PILGEQVGWR RWAAIGVGFI GVLIILQPGS GVFQIAALIP LLAALMFALY GLLTRYVARR
DTTATSFFYT GVYGMLFVTP LGVWWWEPMT AADWGWMATL CVTGALGHWL LIKCYEMAEA
SAVQPFAYMQ LPWAAMIGLL VFGEDMRTNV IIGAAIVVAA GLFTFWRESL KRAAR
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