| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0141 |
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| Symbol | |
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| ID | 4078808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 153682 |
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| End bp | 154578 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638005435 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_612136 |
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| Protein GI | 99079982 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0116373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGA TTATTTCGTC CACGATTTCC GAAGACACCA CTGGAATGAA TGATGCATTT
GGCTGGTTTG ATGTATCGGC TGAAGATCGC ACCCGCGTAT CTGCGCTCGA ACCTCTCGTG
CGCGATAATA TTGATGAGAT TATCAACGAC TTTTATGAAC GCGCTGGCGG CTTTGATCAT
TCGGCGTTGA AAATACAGGA CAAAAACAGC CTTGAGCTCA TAAAAGAAGA GCAAAAAAGG
CACTTCCTTG AGCTTATGGA CGCCGGATTG GGCGAAGATT ATTTCCAAAC GCGAAAGAAT
GCTGGCATTT TCAACGAGCG ATTTGGCGTT TCCCCAAGTT TTTACATGGG CGCTTATTCC
TATTTTTACG ATAGGATTTG TGACATCGTA AAAAGGGAAG CAAAAAACAA AGATGAAGCG
ATTGAGATCT TTTTGTCGCT TCACAGGATT GCAGCGTGCC ACAAGTCTTT GACAATTGAG
GCCTTTGCCA AGGCTCGGGA ACAGACCATT GAGGATCGGG AACGGGAAAT CAGCGAACTG
CCGGTACCGG TGCTCAAGAT GCGCGAGGGC CTTCTTCTGG TGCCGGTCGT CGGTACCCTC
GACAGCCACC GTGCCAGACT ACTGACGTCT CGCATGCTGG ACGAAATCAG CAAGGTCGGC
GCTCGCGCGG TGGTGCTCGA CATAACGGGC GTCCCCGCCG TCGACAGCGC TGTTGCAAAC
CACCTGATTC AATCCATGGG CGCTGCCCGC CTGATGGGCG CACATTCCGT CCTGACGGGC
ATAAGTTCGG ATGTCGCTCA ATCCCTCGTG AAGCTCGGCG TCACCGGTGA AACCCTGAAC
CCAGCCGGCG ACCTTCAGCG TGGGATCGAA ACGGCAGAAG CGCTTTTGGA CGGCTAA
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| Protein sequence | MSQIISSTIS EDTTGMNDAF GWFDVSAEDR TRVSALEPLV RDNIDEIIND FYERAGGFDH
SALKIQDKNS LELIKEEQKR HFLELMDAGL GEDYFQTRKN AGIFNERFGV SPSFYMGAYS
YFYDRICDIV KREAKNKDEA IEIFLSLHRI AACHKSLTIE AFAKAREQTI EDREREISEL
PVPVLKMREG LLLVPVVGTL DSHRARLLTS RMLDEISKVG ARAVVLDITG VPAVDSAVAN
HLIQSMGAAR LMGAHSVLTG ISSDVAQSLV KLGVTGETLN PAGDLQRGIE TAEALLDG
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