| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0130 |
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| Symbol | |
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| ID | 4078735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 137814 |
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| End bp | 140432 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005418 |
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| Product | ATPase AAA-2 |
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| Protein accession | YP_612125 |
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| Protein GI | 99079971 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0581017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTGA ACAAGTTCAC TGAACGGGCG CGTGGTTTTG TGCAGGCGTC CCAGACGATT
GCGTTGCGTG AAGGCCACCA GCGCCTGACA CCGGAACATA TCCTGAAAGC ATTGCTCGAC
GACGATCAAG GCATGGCGTC GAACCTGATT GCGCACGCGG GCGGGAACAT CGCGCGTGTG
AGCGAGGCAG TAGAAGCCGC GATCGGCAAG TTGCCGAAGG TTTCTGGCGA TGCTGGTCAG
ATCTATCTGG ACGGGCAAAC CGCCAAGGTT CTGGATGAAG CGGCCAAGGT GGCCGAAAAA
GCGGGCGACA GCTTTGTCCC GGTCGAGCGA CTGCTGACAG CGCTTGCCCT CGTGAAATCC
AAGGCAAAGG ATGCGCTGGA CGCAGGTGGC GTGACGGCGC AGAAGCTCAA TGAGGCGATC
AACGACGTAC GCAAGGGGCG CACGGCGGAT ACCGCAACCG CAGAGGATAC TTATGAGGCG
CTGAAGAAGT TCACCCTCGA CCTCACGGAG CGTGCGAGAG AGGGCAAGAT CGACCCGATC
ATTGGCCGCG ATGACGAAAT TCGCCGCGCC ATGCAGGTTC TGTCGCGTCG CACCAAGAAC
AACCCTGTGC TGATCGGCGA GCCGGGCGTG GGTAAAACCG CGATTGCCGA AGGCATGGCT
TTGCGGATCG TCAATGGCGA CGTGCCCGAG AGCCTCAAGG ACAAGCGTCT GCTAGCGCTC
GACATGGGCG CGCTTATTGC GGGTGCGAAA TATCGCGGTG AGTTCGAGGA ACGCCTCAAG
GGCATCCTCA ATGAGGTGAC CGATGCGGCG GGCGAAATCA TTCTGTTTAT CGACGAGATG
CATACCCTTG TAGGGGCAGG CAAATCCGAT GGCGCGATGG ATGCGGCCAA CCTCATCAAG
CCGGCACTTG CTCGCGGTGA GCTGCACTGT ATCGGCGCAA CCACGCTCGA TGAGTATCGT
AAATACGTAG AGAAGGACGC AGCCCTGGCC CGCCGCTTCC AGCCTGTCAT GGTCACGGAG
CCGACGGTGG AAGACACGAT TTCCATCCTG CGTGGCATCA AGGAAAAGTA CGAGCTGCAC
CACGGTGTCC GCATTGCGGA TGCGGCGCTG GTGTCTGCCG CTACGCTCTC GAACCGCTAT
ATCACCGACC GGTTCCTGCC CGACAAGGCG ATTGACCTTA TGGACGAGGC GGCATCGCGC
CTGCGGATGG AGGTGGACTC CAAACCCGAA GAGCTCGACG CGCTGGATCG GCAGATCCTG
CAGATGCAGA TCGAAGAAGA AGCGCTGAAG CTCGAGGATG ATGCGGCGTC GAAGGACCGG
TTGGAGCATC TCCAGAAGGA ACTGGCAGAC CTGCAGGAGC GTTCGCGCGA AATGACCGCG
CAATGGCAGT CCGAGCGTGA CAAGCTCGCC TCTGCGCGTG ATCTGAAAGA GCAGCTTGAT
CGCGCACGTG CCGAACTCGA CATCGCCAAA CGCGAGGGGA ATCTCGCCAA GGCGGGTGAG
CTGTCTTATG GCGTCATTCC GGGGTTGGAA AAGCAGCTCT CTGAGGCCGA ACAGAAAGAA
GAGCAGGGCC TGATGGTCGA GGAAGCGGTG CGCCCGGAGC AGATTGCAGC TGTGGTGGAA
CGCTGGACCG GTATTCCGAC CTCAAAGATG TTGGAGGGCG AGCGCGAGAA GCTCTTGCGG
ATGGAAGATG GCCTGCACAA GCGCGTCATT GGTCAGAACG CCGCCGTGAC GGCCGTGGCT
AACGCGGTGC GTCGGGCGCG CGCGGGGCTC AATGATGAGA ACCGTCCGCT GGGGTCCTTC
CTATTCCTTG GGCCGACCGG CGTGGGGAAA ACCGAGCTCA CCAAAGCTGT GGCCGAGTTC
CTCTTTGACA ATGACAGCGC GATGGTACGC ATCGACATGT CGGAGTTCAT GGAGAAACAC
GCAGTCGCAC GTCTGATCGG TGCCCCTCCG GGCTATGTCG GGTATGACGA GGGCGGCGTG
CTCACCGAGG CGGTGCGGCG CAGACCTTAT CAGGTGGTTC TGTTTGACGA GGTCGAAAAG
GCCCACCCGG ACGTGTTCAA CGTGCTCTTG CAGGTGCTCG ATGATGGCGT GCTGACCGAT
GGTCAGGGCC GGACCGTGGA CTTCAAGCAG ACGCTGATCA TCCTGACATC AAACCTCGGA
GCGCAGGCGC TGAGTCAGCT GCCAGATGGC GCGGATGCAG CAGATGCCAA ACGCGACGTG
ATGGATGCGG TGCGGGCACA CTTCCGGCCC GAGTTCCTGA ACCGTCTGGA TGAGACCGTG
ATCTTTGACC GTCTGGGACG GCACGATATG GACGGTATCG TCGAAATCCA GCTTGGGCGT
CTCGCCAAGC GTCTGGCGCA ACGCAAAATC ACGCTGGAGC TGGATGAGGG GGCAAAGACC
TGGCTCGCAG ATGAGGGCTA CGACCCGGTG TTCGGGGCGC GTCCGCTCAA ACGCGTGATC
CAGCGCGCCT TGCAAAACCC GTTGGCCGAG GCCCTGCTGG CTGGCGACAT CAAGGACGGT
GAAATCGTTC CCGTGTCTGC CGGGGCTGAG GGGCTGGTGA TCGGGGATCG CGTCGGCAGC
TCCGATCGTC CGCTGCCGGA TGATGCCGTG GTGCATTGA
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| Protein sequence | MDLNKFTERA RGFVQASQTI ALREGHQRLT PEHILKALLD DDQGMASNLI AHAGGNIARV
SEAVEAAIGK LPKVSGDAGQ IYLDGQTAKV LDEAAKVAEK AGDSFVPVER LLTALALVKS
KAKDALDAGG VTAQKLNEAI NDVRKGRTAD TATAEDTYEA LKKFTLDLTE RAREGKIDPI
IGRDDEIRRA MQVLSRRTKN NPVLIGEPGV GKTAIAEGMA LRIVNGDVPE SLKDKRLLAL
DMGALIAGAK YRGEFEERLK GILNEVTDAA GEIILFIDEM HTLVGAGKSD GAMDAANLIK
PALARGELHC IGATTLDEYR KYVEKDAALA RRFQPVMVTE PTVEDTISIL RGIKEKYELH
HGVRIADAAL VSAATLSNRY ITDRFLPDKA IDLMDEAASR LRMEVDSKPE ELDALDRQIL
QMQIEEEALK LEDDAASKDR LEHLQKELAD LQERSREMTA QWQSERDKLA SARDLKEQLD
RARAELDIAK REGNLAKAGE LSYGVIPGLE KQLSEAEQKE EQGLMVEEAV RPEQIAAVVE
RWTGIPTSKM LEGEREKLLR MEDGLHKRVI GQNAAVTAVA NAVRRARAGL NDENRPLGSF
LFLGPTGVGK TELTKAVAEF LFDNDSAMVR IDMSEFMEKH AVARLIGAPP GYVGYDEGGV
LTEAVRRRPY QVVLFDEVEK AHPDVFNVLL QVLDDGVLTD GQGRTVDFKQ TLIILTSNLG
AQALSQLPDG ADAADAKRDV MDAVRAHFRP EFLNRLDETV IFDRLGRHDM DGIVEIQLGR
LAKRLAQRKI TLELDEGAKT WLADEGYDPV FGARPLKRVI QRALQNPLAE ALLAGDIKDG
EIVPVSAGAE GLVIGDRVGS SDRPLPDDAV VH
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