| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0129 |
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| Symbol | |
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| ID | 4078734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 136844 |
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| End bp | 137569 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005417 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_612124 |
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| Protein GI | 99079970 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0638289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCC CCCTCGCAGA TGACCGCCTG ATCGTTGCCA TGGATGTTCC CAACGCCCTT
GAAGGGCTCA AACTGGCGGA ACAGCTGGGT GACGCGGTCT CATTCTACAA AATCGGCCTT
GGGATGCTCA CCGGGGGCGG GCTGGCCCTC GCAAATGAGT TGAAGCAAGA GTTAGGTAAA
AAGATCTTCC TCGACATGAA GCTCTTTGAC ATCGGGGCCA CCGTGGAAAA CGCGGTGCGC
GGATTGGCGC AGTTCGATCT CGACTTCCTG ACCGTGCACG GCGACCCCTA TGTGGTGCGC
GCCGCAAAAG AAGGGGCTGC GGGCAAGGAT CTGAAGATCC TCGCCGTGAC AATCCTTACG
TCGCTGGATC GCGACGATCT GGATGGGGCG ATGATCAAAT CCGGTGAGAT CAAAGATCTG
GTGCAAGAGC GCGCCGGCAA GGCGTTCTCG GCTGGCGCAG ATGGCGTCAT TGCAAGCCCG
CAGGAAGCCG CCATGATCCG CTCCCTGCCC GAAGCAGAAG GCAAGCTGAT CGTCACTCCT
GGTGTGCGCC CGGTGGGCGC TGACCTTGGC GACCAGAAGC GCGTTACAAC CCCGGCGCAG
GCTCTTGCTT CCGGCGTTGA CCACATCGTT GTCGGTCGCC CGATCTGGCA GGCGGAAGCA
CCCCGGGTAG CGGCAGAGTC AATTCTGCAA GAGATGAACA GCCCGCAGGC GAAAGCGCCG
AACTGA
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| Protein sequence | MTSPLADDRL IVAMDVPNAL EGLKLAEQLG DAVSFYKIGL GMLTGGGLAL ANELKQELGK
KIFLDMKLFD IGATVENAVR GLAQFDLDFL TVHGDPYVVR AAKEGAAGKD LKILAVTILT
SLDRDDLDGA MIKSGEIKDL VQERAGKAFS AGADGVIASP QEAAMIRSLP EAEGKLIVTP
GVRPVGADLG DQKRVTTPAQ ALASGVDHIV VGRPIWQAEA PRVAAESILQ EMNSPQAKAP
N
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