| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0115 |
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| Symbol | |
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| ID | 4078700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 122393 |
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| End bp | 123379 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005402 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_612110 |
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| Protein GI | 99079956 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.342029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATC AACTGATCTT TGCCATGGAG GTGACGCTCA ACGGTCTGAT GGCGGGGGTG
CTTTATGCGC TGGTCGCGCT GGGCTTCGTG CTGATCTACA AGGCCTCGGG CATTTTCAAT
TACGCGCAAG GTGTTATGGC GCTATTTGCG GCGATGACCC TTGTCGGGAT CATGCAGGGG
CAGGTGCCCT TTTCCCATCT GATCAACGCG GTCTTTGGCG GCCATATCAC CCACTTTGGA
TGGACAGTCC CATCCTTCGT GGCAATCATG ATGACTGTCG CGGTCATGGT GTTGCTGGCG
TGGCTTGTGC AGGTCCTGGT GATGAAACAC CTCGTCGGCC AGGAACCGAT TATCCTGTTC
ATGGCGACCA TCGGGCTGGC CTATTTCCTC GAAGGCGTGG CGGACCTCAT GTGGGGTTCC
GAGATCAAGA CGCTCGATGT GGGGCTGCCG CAGGGGATCA ACCTCTGGAT CGATGAGACC
ACCTTCGGGA TCTTTGGCTA CGGCTTCTTC ATCGACAACC TCGATATCGT GGCGACGGTA
ATTGCCGCGC TGCTGGTTAC CGGGCTTGTG CTCTTTAGTC AGTACACCAA GCAGGGCCGT
GCGATGCGCG CGGTGGCGGA TGATCACCAG GCAGCGCTGT CGGTCGGCAT TTCGCTCAAC
TACATCTGGG TGCTGGTCTG GTCGGTTGCC GGGTTCGTCG CACTGGTCGC GGGCATCATG
TGGGGCACCA AATCCGGCGT CCAGTTCTCC TTGTCGCTGA TCGCGCTTAA GGCGCTGCCT
GTTCTGATGC TCGGGGGCTT CACCTCGATC CCCGGTGCGA TCGTTGGCGG CTTGATCATC
GGGGTCGGAG AGAAGCTCTT TGAATTCCTG ATCGGCCCCA TGGTTGGCGG TGCAACCGAG
AACTGGTTCG CCTATGTGCT GGCGCTGATC TTCCTGGTGT TCCGTCCGCA AGGCCTCTTT
GGCGAGAAGA TCATTGAACG CGTCTGA
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| Protein sequence | MPDQLIFAME VTLNGLMAGV LYALVALGFV LIYKASGIFN YAQGVMALFA AMTLVGIMQG
QVPFSHLINA VFGGHITHFG WTVPSFVAIM MTVAVMVLLA WLVQVLVMKH LVGQEPIILF
MATIGLAYFL EGVADLMWGS EIKTLDVGLP QGINLWIDET TFGIFGYGFF IDNLDIVATV
IAALLVTGLV LFSQYTKQGR AMRAVADDHQ AALSVGISLN YIWVLVWSVA GFVALVAGIM
WGTKSGVQFS LSLIALKALP VLMLGGFTSI PGAIVGGLII GVGEKLFEFL IGPMVGGATE
NWFAYVLALI FLVFRPQGLF GEKIIERV
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