| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0114 |
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| Symbol | |
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| ID | 4078699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 121536 |
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| End bp | 122354 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005401 |
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| Product | ABC transporter related |
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| Protein accession | YP_612109 |
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| Protein GI | 99079955 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.95101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGATG CGGCTGACAG CTATGTGACC GAGGATGGCC GCACCATTGG CGGCGTGGTC
ATGGAGATGA AAAACATCAC CCTGCGCTTT GGCGGCGTCG TGGCGATCAA GGACATCTCT
TTTGACATCC GCGAAGGTGA AATCCGTGCG ATTATCGGCC CCAACGGGGC GGGTAAGTCC
TCCATGCTGA ACGTCATCTC GGGGTTCTAT GTCCCCCAGG AGGGCGAAGT CTGGTTCCAC
GGCGCCAAGC GCCCGCCGAT GAAACCTTAT GAGGTGGCTC GGCAGGGCAT TGCGCGGACG
TTCCAGAACA TCGCGCTGTT TGACGGTATG AGCGTGCTCG ACAACGTGAT GACGGGGCGG
CTCAATTACA TGAAGGCCGG CATGTTCCAG CAGGCTTTCT GGAAGGGACG CGCTGAAAAG
GAAGAGGTCG AAAACCGCGA GGTCGTGGAA AAGATCATCG ATTTCCTTGA AATTCAGGCG
ATCCGCAAAA CGCCCGTCGC CCGTCTGCCC TACGGTTTGA AAAAACGCGT CGAGCTTGCG
CGCGCCCTGG CGGCCGAGCC GAAGCTGTTG CTTTTGGACG AGCCGATGGC CGGTATGAAC
GTCGAGGAAA AGGAGGACAT GTCCCGCTTT ATTCTCGATG TGAACGACGA GTTTGGCACA
ACCATCGCCC TGATCGAACA CGACATGGGC GTTGTGATGG ATCTCTCGGA TCGCGTGGTG
GTGATGGATT ACGGCAAGAA GATTGGTGAC GGCACCCCGG ACGAAGTGCG CAACAATCAA
GACGTTATCG ACGCCTATCT GGGAGTCTCC CATGACTGA
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| Protein sequence | MLDAADSYVT EDGRTIGGVV MEMKNITLRF GGVVAIKDIS FDIREGEIRA IIGPNGAGKS
SMLNVISGFY VPQEGEVWFH GAKRPPMKPY EVARQGIART FQNIALFDGM SVLDNVMTGR
LNYMKAGMFQ QAFWKGRAEK EEVENREVVE KIIDFLEIQA IRKTPVARLP YGLKKRVELA
RALAAEPKLL LLDEPMAGMN VEEKEDMSRF ILDVNDEFGT TIALIEHDMG VVMDLSDRVV
VMDYGKKIGD GTPDEVRNNQ DVIDAYLGVS HD
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