| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0099 |
|---|
| Symbol | |
|---|
| ID | 4078765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 104599 |
|---|
| End bp | 105405 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638005386 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_612094 |
|---|
| Protein GI | 99079940 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAGC TCTCATTGGC CAGCCATAAT GGCCAGACCG CACCGGATAC GCAGTGGGAT
CAAAGTCCGC TCGCCATTCG TGGTCTGACT GTCAGCTACG GTGAAAAGCC TGCGGTGTTT
TCGGTCGACA TGACAGTTGA GCCGGGCCAG ATGACTGCGA TTATCGGGCC AAATGGAGCA
GGGAAATCTA CCCTTCTGAA GGCCGCGCTG GGCATTGTGC CGCCCGTGTC CGGCCGCGTG
CAGGTGTTTG GTCGCCCGCT CGATCATCAA CGCGCGCGGA TCGCCTATGT GCCACAACGC
GCATCAGTTG ATTGGGATTT CCCAACCCGG GTGATCGACG TGGTGATGAT GGGGCTCTAT
CGCGAGTTGG GGCTTTTGGG GCGCATCCGG GGGACCCACC ACAAGATCGC GAGAGACTGT
CTGGAGCGCG TCGGGATGAG CGAATTTGCC ACCCGTCAGA TCGGGCAGCT TTCGGGCGGC
CAGCAGCAGC GCGTGTTCCT CGCGCGCGCC CTGGCACAGG GCGCAGACCT CTATTTGCTG
GACGAGCCCT TTGCAGGCGT GGATGCGGCC ACGGAAAAAG CCATCATTGG CGTCCTCAAG
GCTCTGCGGG CCGAGGGCAA GACCGTGGTG GTGGTGCATC ATGATCTGGC GACGGTAGGG
GACTATTTCG ACAATGTGTT CCTGATCAAC ACCCGCAAGG TGGCAGAAGG ACCGGTTGCC
GAGGCCTTCA CCGCGGAGAA TTTGCAGACG GCTTATGGTG GGCGGTTGGC CACGGCGCAG
ATCGAACAGA TCGCGCGGCC TCTGTGA
|
|---|
| Protein sequence | MMQLSLASHN GQTAPDTQWD QSPLAIRGLT VSYGEKPAVF SVDMTVEPGQ MTAIIGPNGA
GKSTLLKAAL GIVPPVSGRV QVFGRPLDHQ RARIAYVPQR ASVDWDFPTR VIDVVMMGLY
RELGLLGRIR GTHHKIARDC LERVGMSEFA TRQIGQLSGG QQQRVFLARA LAQGADLYLL
DEPFAGVDAA TEKAIIGVLK ALRAEGKTVV VVHHDLATVG DYFDNVFLIN TRKVAEGPVA
EAFTAENLQT AYGGRLATAQ IEQIARPL
|
|---|
| |