Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0098 |
Symbol | |
ID | 4078764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 103637 |
End bp | 104599 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638005385 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_612093 |
Protein GI | 99079939 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAACC GACGTCATAC GCTTTTGGGG CTTGGGGCTG TCGCGGCTTT GGCTGCGACA CCGGTCGTTG CCACAGAAGG GCGGCTCGAT GTTGTGGCGA CCACGGGCAT GATCGCGGAT GCTGCGCGTC AGATTGGCGG CGCGGATGTA GAGGTCACGG CGCTGATGGG TGCGGGGGTC GACCCGCACG CCTATCGCCA GACCCGCAGC GACATCGCGG CGATGACCCG CGCGGATCTG GTCCTGTGGC ATGGCCTCTA TCTCGAGGCG CAGATGGAGG ACTTCTTTCA CGGTTTGGCC CGCAAGCGCG AGGTCGTGGC GGTGGCGGAG GCCATGCCCA AGGATCTTTT GCGGGGTCAC GACGACTATG CGGATAAGTT CGACCCGCAC GTCTGGATGA GCCCCGAGCT GTGGAAGCAT GTCGTGCGAG AGGTGGCGCG CGCGCTCACG GCTGCGCGTC CCGCGCTTGC GGATCGTTTT GCCGCCAACC TTGAGCGCCA CCTTGGCGAG CTAGATCGGC TGTCAGATTA CGGACGGCGT GTTGTGTCCG GCGTTCCGCA GGAAAACCGC GTGCTGGTCA CCGCGCATGA CGCCTTTGGA TATTTTGGTC GTGACTACGG GTTTGAGGTG ATGGGCCTGC AGGGCATCTC CACCCAATCC GAGGCGGGGC TGAACCGGAT AGGCGCCTTG GTCGACACCC TGGTGGAGCG CCAGATCAAG GCCGTTTTTG TAGAGACCTC TGTTGCGGAT CGTTCCATGC GGGCGCTGAT CGAAGGGGCG GCGGCCAAAG GGCATGCAGT TGCGATTGGC GGCGAGCTCT TCTCGGACGC GATGGGGGCG GATGGCACCT ATGAGGCGAC CTATGTGGGC ATGCTCGACC ATAACTTTAC CACCATTGCC GGCGCTTTGG GCGCAGAGGT GCCTGGGGCT GGGATGGACG GCAAGCTTGG GGCTGGGCAC TGA
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Protein sequence | MLNRRHTLLG LGAVAALAAT PVVATEGRLD VVATTGMIAD AARQIGGADV EVTALMGAGV DPHAYRQTRS DIAAMTRADL VLWHGLYLEA QMEDFFHGLA RKREVVAVAE AMPKDLLRGH DDYADKFDPH VWMSPELWKH VVREVARALT AARPALADRF AANLERHLGE LDRLSDYGRR VVSGVPQENR VLVTAHDAFG YFGRDYGFEV MGLQGISTQS EAGLNRIGAL VDTLVERQIK AVFVETSVAD RSMRALIEGA AAKGHAVAIG GELFSDAMGA DGTYEATYVG MLDHNFTTIA GALGAEVPGA GMDGKLGAGH
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