| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0097 |
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| Symbol | |
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| ID | 4078763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 102371 |
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| End bp | 103426 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638005384 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | YP_612092 |
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| Protein GI | 99079938 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGCC AAACCGCAGA AGACGGCACG CAGCCGCCGA AGACCTCCGC TGCCAAACCC
TCCGCCAAGG CCAAGCCGAC CGCAGCCGCC ACGCAGGACC ATGAACACAG CGACCTGCCC
CGCAATCCGG GTATCGCGCT TGATCTCGAC TGGGCCCTGA GCCTGGAGGC CAATACCTCC
GCGATTGAAC GCCGCTGCGC GAGCCTGCCG GGTCGGCGCT CGGTCAAGAA GGACTATCAG
GCCGCTTGGC TCTTGAAGGC GATCAGCCTC ATCGATCTCA CCACGCTCTC GGGCGATGAT
ACCGAGGCCC GCGTGCGCCG TCTCTGCGCC AAGGCGCGCC AGCCGGTGCG AGCGGATATT
CTCTCGGCAC TTGGCATCGA CGGGATCACG ACCGGAGCCG TCTGTGTCTA TCACGACATG
ATCCCCGCCG CCGTGCGCGC GCTGCATGGC ACCCATATCC CGGTTGCCGC CGTCTCTACG
GGCTTTCCGG CGGGGCTGTC GCCCTTCCAC CTGCGGCTCG AGGAAATCCG CGAAAGCGTG
CGGGCCGGCG CCAAGGAAAT CGACATTGTG ATCTCGCGCC GCCATGTGCT CTCGGGGGAC
TGGCAGGCGC TTTATGACGA GATGAAAGCC TTCCGCGAGG CCTGCGGAGA TGCCCACGTC
AAGGCGATCC TCGCCACTGG CGAGCTTGGC ACTCTGCGCA ATGTCGCCCG CGCCTCGATG
ATCTGCATGA TGGCGGGTGC CGACTTCATC AAGACGTCCA CTGGCAAAGA GAGCGTCAAC
GCCACCCTGC CCGTCTCGTT GGTGATGATC CGCGCCATTC GCGAGTATTA CGAGCGCACC
GGCTTTCATG TGGGCTACAA GCCCGCTGGT GGCATCTCCA AGGCCAAAGA CGCGCTGGTG
TACCTCAGCC TCATGAAAGA GGAACTTGGC AACCGCTGGC TGCAGCCGGA CCTGTTCCGC
TTTGGCGCGT CCAGCCTTCT GGGCGACATC GAACGCCAGC TCGAACACCA TGTGACCGGC
GCCTATTCCG CTGGCTACCG CCACCCGATG GCGTGA
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| Protein sequence | MDSQTAEDGT QPPKTSAAKP SAKAKPTAAA TQDHEHSDLP RNPGIALDLD WALSLEANTS
AIERRCASLP GRRSVKKDYQ AAWLLKAISL IDLTTLSGDD TEARVRRLCA KARQPVRADI
LSALGIDGIT TGAVCVYHDM IPAAVRALHG THIPVAAVST GFPAGLSPFH LRLEEIRESV
RAGAKEIDIV ISRRHVLSGD WQALYDEMKA FREACGDAHV KAILATGELG TLRNVARASM
ICMMAGADFI KTSTGKESVN ATLPVSLVMI RAIREYYERT GFHVGYKPAG GISKAKDALV
YLSLMKEELG NRWLQPDLFR FGASSLLGDI ERQLEHHVTG AYSAGYRHPM A
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