| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0095 |
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| Symbol | |
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| ID | 4078761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 98540 |
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| End bp | 99913 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005382 |
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| Product | peptidase M16-like |
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| Protein accession | YP_612090 |
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| Protein GI | 99079936 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.212806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCT TCAAGACAGC CCGACGTGCG CGTGCTTTTG ACATGCGTCC CGTGAAACGC
GCCCTGATGG CGCTATGCCT CGGGTTTGCA CTAATGTTCG CTGCGCAGAT GGCGCGGGCG
GAGATTGACA TCAAGGAAGT GACCTCGCCT GGCGGCATCA AGGCTTGGCT GGTCGAAGAT
CACAGTATCC CCTTCGCGGC GCTGGAACTG CGGTTCCGGG GCGGCACCTC GCTGGATGCG
CCCGGAAAAC GCGGGGCCGT GCATCTGATG GGCGGGCTCC TCGAAGAGGG GGCAGGGGAG
CTGCGTGCGC AGGACTATGC CCGCGCGCTT GAGGCCCTTG CTGCAGATTT TTCCTATGAC
GCGGACAAGG ACACGGTTTC AATTTCTGCA AGTTTCCTCA GCGAGAACCG GGATGACGTG
ATGGAGCTCT TGCGCCAGAC CATTCAGGAA CCACGGTTTG ATCAGGACGC TTTGGATCGG
GTGCGTGCGC AGGTGCTTGT GGGCTTGCGT TCGGACCAGA CCGACCCAAA TGCGATTGCG
GGCAAGACCT TTGCCCAGCA GGCCTTTGGC GATCATCCCT ATGGCAGCGA TGGCAAAGGC
ACCATCGAGA GTGTCTCGGC GCTCACGCGT CAGGATATGT TTGCCGCGCA TGAGGCAGTG
TTTGCCCGCG ATCGGCTTTA TGTGAGCGCG GTGGGCGACA TCACCCCCGA AGCCTTGGGG
GCGTTGCTCG ACGAGCTTTT GGGCGATCTC CCTGCCGAGG GTGCGCCGAT GCCCGGTCCG
GCAGAAGTCC TGTTGACCGG GGGGACCACC GTGGTTCCCT TTGCAACGCC GCAATCGGTG
GCGCTCTTTG GGCAGAAGGG TATGGATCGA AACGATCCCG ACTTCTTTGC CGCTTATGTG
CTTAACCAGA TTTTGGGCGG TGGGTCGTTT GAAACCCGCC TGATGCAAGA GGTACGCACC
AAGCGGGGCC TCACCTACGG TGTCTATAGC TATCTGGTGC CGCGGGATCT GGCTGCCACC
TACATGGGCT CATTTGCCTC TGCCAATGAG AAAATGGCCG AAGCGGTGGG CGTGGTGCGC
GATCAGTGGC AGGCTCTGGT CGAGAGCGGT GTCACGGAGG CGGAGTTGCA GGACGCCAAG
ACCTATCTGA CGGGTGCCTA TCCCCTGCGG TTCAATGGTA ACAGCCAGAT TGCATCGATC
CTTGTGGCGA TGCAGATGGA CGGGCTTTCG ACCGATTACG TGGTGACCCG CAACCAGAAG
GTCGAGGCGG TGACGCTTGA GGATGTGAAC CGGGTCGCCA AAGAGCTGCT TGATCCCGAA
GGGCTGCGAT TTGTGGTCGT CGGAGAGCCC GAGGGGCTGA GTTCTACGGA TTAA
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| Protein sequence | MSRFKTARRA RAFDMRPVKR ALMALCLGFA LMFAAQMARA EIDIKEVTSP GGIKAWLVED
HSIPFAALEL RFRGGTSLDA PGKRGAVHLM GGLLEEGAGE LRAQDYARAL EALAADFSYD
ADKDTVSISA SFLSENRDDV MELLRQTIQE PRFDQDALDR VRAQVLVGLR SDQTDPNAIA
GKTFAQQAFG DHPYGSDGKG TIESVSALTR QDMFAAHEAV FARDRLYVSA VGDITPEALG
ALLDELLGDL PAEGAPMPGP AEVLLTGGTT VVPFATPQSV ALFGQKGMDR NDPDFFAAYV
LNQILGGGSF ETRLMQEVRT KRGLTYGVYS YLVPRDLAAT YMGSFASANE KMAEAVGVVR
DQWQALVESG VTEAELQDAK TYLTGAYPLR FNGNSQIASI LVAMQMDGLS TDYVVTRNQK
VEAVTLEDVN RVAKELLDPE GLRFVVVGEP EGLSSTD
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