| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0089 |
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| Symbol | |
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| ID | 4078755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 90990 |
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| End bp | 92264 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005376 |
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| Product | Fmu (Sun) |
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| Protein accession | YP_612084 |
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| Protein GI | 99079930 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACC ATCCTTCCTC CGCCTCAGAT GCCCGTCGCG CTGCGGTTGC GCTTCTCGAC
AAGGTTCTGG GCGAAGGGCT TTTGCTCTCG GAGTGTCAGA CGCAGATCTT GGAGCGGCTC
GAGCCCGCGG ATCGGGCCCG CGCGCAACGC CTCGCGCTGC AGGTCCTGCG CGCGCTGGAA
CGTGCCGACC GCGTGCTTGC AAAACATTTG CGCAAGCCGC CAGCGCTTCA TGTGCGCAAT
GCGTTGCGTC TGGGCACCGT CGAGCTCTGC TCGGGCGGCG CGGCGCATGG GGTTGTGAAT
GACATCGTCA ATCTCGTGGC GCGTCACCGT CGCCATGGCC AGCTCAAGGG GCTGGTCAAT
GCGGTGCTGC GCAAGGTGGC CACCGAGGGG CCCGGCGAAT GGGCCAAGCT GCGGGTGCCG
CGTTTGCCCA AATGGCTGCG CGCGCCTCTG GTGCAGGCGT GGGGCAGCGA TGCGATGCTC
GCAATCGAAG CGGCCCATTT TAAAGGCGCG CCTTTGGATC TGAGCGCCAA GCCGGGGGCA
GATCTGGCGG CGCTGGAAGG TGCGATGACC CCTACTGGAA GCCTGCGTTT GCAGGACGCG
GGTCAAGTCT CGGCCCTTCC CGGCTATGAA CAGGGGGCGT GGTGGGTGCA GGACGCAGCC
GCAGCCCTTC CGGCGCAGCT TTTGAATGCT GCGCGCGGCG AACGTGTGCT TGATCTCTGT
GCGGCGCCCG GCGGCAAAAC CTTGCAGATG GCTGCCGCAG GGGCTCAGGT CACAGCGGTT
GATATTTCCG AAAACCGCCT TGCGCGTCTG CAGGAGAACC TCACGCGCAC CGGGCTCTCT
GCCACGGTTG TTGCAGGCGA TGTGTTTGAA CAAAAGGGGC AGTATGATGC GGTTCTGCTG
GATGCCCCCT GTTCAGCCAC AGGTACCATC CGCCGCCATC CGGATTTGCC CCATGCCAAG
GACGGTGCCG GTTTTGGCGG GCTCATCGAG CTGCAGGCGC AGATGCTCGC CCACGCCTGG
GGGCTGGTGC GGCCCGGAGG GCGTCTGGTC TATTGTACCT GTTCCCTCTT GCCAGACGAA
GGTGAATGTC AGGTCGAGGA TATGCTCGAG ATGTTCCCCG GTGCCCGGAT CGGTGACCGG
CTGAAGTCGC TTTCGGGTAT TGATCCAAGT TGGATCACCG AAGAAGGTGG CCTGCGCCTC
AGACCGGACT ATTGGGCCGA GATTGGCGGT ATGGACGGGT TCTACATGGC CGAACTCGTA
AAGGCCGAGG TCTAA
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| Protein sequence | MTDHPSSASD ARRAAVALLD KVLGEGLLLS ECQTQILERL EPADRARAQR LALQVLRALE
RADRVLAKHL RKPPALHVRN ALRLGTVELC SGGAAHGVVN DIVNLVARHR RHGQLKGLVN
AVLRKVATEG PGEWAKLRVP RLPKWLRAPL VQAWGSDAML AIEAAHFKGA PLDLSAKPGA
DLAALEGAMT PTGSLRLQDA GQVSALPGYE QGAWWVQDAA AALPAQLLNA ARGERVLDLC
AAPGGKTLQM AAAGAQVTAV DISENRLARL QENLTRTGLS ATVVAGDVFE QKGQYDAVLL
DAPCSATGTI RRHPDLPHAK DGAGFGGLIE LQAQMLAHAW GLVRPGGRLV YCTCSLLPDE
GECQVEDMLE MFPGARIGDR LKSLSGIDPS WITEEGGLRL RPDYWAEIGG MDGFYMAELV
KAEV
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