| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0087 |
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| Symbol | |
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| ID | 4078753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 89693 |
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| End bp | 90502 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005374 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | YP_612082 |
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| Protein GI | 99079928 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGATA AACCAGGGAT CGTGATCACC GGCGCTTCGG GGCGCATGGG GCAAATGCTG
ATCAAGACGG TGCTGGACAG CGACAAAGCC GAACTTGCCG GTGTGGTCGA GCGCGAAGGC
CACGACTGGG TCGGTCAGGA TATTGGTATC GCAATGGGGG GCGCGGCCCT TGGGGTTGTG
GTCACCGACG ATGCGGGCTC GGCCTTCGCG GGCGCACAGG CGGTCATTGA TTTTACCGCA
CCACAGGCCA CGATCGCCTT TTCCAAACTG GCCGCAGAGG CTGGCTGCGT ACATGTGATC
GGAACCACGG GCATGAGCGA GGCGGAAATC GCCCAGCTGG ATCCCGCGGC CCAGGACACG
GTTCTGGTCC GCGCCGGAAA CATGTCTCTG GGCGTTAACC TGTTGGTTCA ACTGACCAAA
AAGGTCGCCG CCGCACTCGA CGAAGATTTC GATATCGAAG TGATCGAGGC ACATCACCAC
CACAAGGTGG ACGCGCCCTC GGGCACCGCA TTGATGCTTG GGGAAGCTGC GGCAGAGGGC
CGCGGTGTGG CGCTTGCCGA GGTTTCGGAT CGGGGGCGTG ATGGGATCAC GGGTGCACGC
AAAAAAGGCG ACATTGGTTT CTCGGCCATT CGCGGTGGCG ACATCGTCGG CGAGCATGAC
GTTCTTTTTG CAGCGGCGGG CGAGCGCATC GTGCTGCGCC ATATGGCCAC AGATCGCGCG
ATCTTTGCCC GTGGCGCACT CAAGGCCGCG CTTTGGGGAC AAGGCAAAGA CGCCGGCGCC
TACGACATGA TTGATGTTCT CGGGCTTTGA
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| Protein sequence | MTDKPGIVIT GASGRMGQML IKTVLDSDKA ELAGVVEREG HDWVGQDIGI AMGGAALGVV
VTDDAGSAFA GAQAVIDFTA PQATIAFSKL AAEAGCVHVI GTTGMSEAEI AQLDPAAQDT
VLVRAGNMSL GVNLLVQLTK KVAAALDEDF DIEVIEAHHH HKVDAPSGTA LMLGEAAAEG
RGVALAEVSD RGRDGITGAR KKGDIGFSAI RGGDIVGEHD VLFAAAGERI VLRHMATDRA
IFARGALKAA LWGQGKDAGA YDMIDVLGL
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