Gene TM1040_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0082 
Symbol 
ID4078748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp85539 
End bp86606 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content63% 
IMG OID638005369 
Producttype I secretion target repeat-containing protein 
Protein accessionYP_612077 
Protein GI99079923 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTGGT TGGCCAGTAT CCTCGGAATG GTCGCAGTTG GCAGTGCGAT CATGATTGAT 
TTTGAGTCCG ATGACGCGGA TTCGGACGAA ACAAATCCCG ATGCCGAAGC GGATGGCACC
GGCAGCACAA TCGTCTCGCC TGACGAATTC CTCACGGGCG TCGACCCTGC TGGCAACGAT
GCCTCCGACA CCACAGAGAC AGACGAGAGC CCTCAGGTCG CTGACGGTGA CGACACTGAT
GAGCGCAATA TCATCCTTGG TACGGAGGAT CTCGATCAGC TCTCTGGCGG CGCGACCGAT
GATGAAATCT CGGGGCTGGG GGGCGATGAT CAGATCAACG GCTATGACGG CAATGACTAC
CTCAGCGGTG GCGCGGGTGC GGATGACCTT TATGGCGCGG CCGGAGAAGA TACACTCCAC
GGCGACGCGG GCGACGATCA CCTCGACGGA GGAGAGGGAC AGGATTCTCT TTCGGGGGGC
GACGGCGCTG ATTCCCTGTT GGGCGGGCTG GAGGCGGACA GCTTGCAGGG CGACGCCGGC
GACGACACGC TGCATGGCGG CTCCGGCGCA GATGTGGTCG CGGGCGGCGC GGGCAGCGAT
GCGGTGCATG GCAACGACGA TGACGACCGT GTGTTTGGCG GCGCGGGCGA GGACACGCTG
TTTGGCGGGC GTGGCAATGA CGTGGTCACG GGCGCAGACG ACGATGCAGA GCGCGACTTT
ATCAACGGCG GTGACGGCGA CGACACGTTG ATTGCCGGGG CGTCGGATTA CGTCACAGGT
GGCGATGGCG CGGACCAGAT ACTGCTTGGC GATTGGATCG CACAAGGCAC TGTCGAGCTG
GTCGATTTCA ACAGCGCCGA GGATCAGCTC CTCCTGATCT ATGATAGCGC GCAGGGTCTG
CCCGAGCTGG AGCTCGAACC CGACCCGGAC ACGCCGGGAC AGACACTTGT GCGTCTGGAC
GGAGAGATCG CCATGCGCCT CACCGGGGCT GAGACCCTGA CAGCAGATGA GATCTTGCTG
GTGGAGGCCG AGGCGGGCGA CGTGGCGCAT CTGCCATTGC CAGAATAG
 
Protein sequence
MLWLASILGM VAVGSAIMID FESDDADSDE TNPDAEADGT GSTIVSPDEF LTGVDPAGND 
ASDTTETDES PQVADGDDTD ERNIILGTED LDQLSGGATD DEISGLGGDD QINGYDGNDY
LSGGAGADDL YGAAGEDTLH GDAGDDHLDG GEGQDSLSGG DGADSLLGGL EADSLQGDAG
DDTLHGGSGA DVVAGGAGSD AVHGNDDDDR VFGGAGEDTL FGGRGNDVVT GADDDAERDF
INGGDGDDTL IAGASDYVTG GDGADQILLG DWIAQGTVEL VDFNSAEDQL LLIYDSAQGL
PELELEPDPD TPGQTLVRLD GEIAMRLTGA ETLTADEILL VEAEAGDVAH LPLPE