| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0082 |
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| Symbol | |
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| ID | 4078748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 85539 |
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| End bp | 86606 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005369 |
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| Product | type I secretion target repeat-containing protein |
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| Protein accession | YP_612077 |
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| Protein GI | 99079923 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTGGT TGGCCAGTAT CCTCGGAATG GTCGCAGTTG GCAGTGCGAT CATGATTGAT
TTTGAGTCCG ATGACGCGGA TTCGGACGAA ACAAATCCCG ATGCCGAAGC GGATGGCACC
GGCAGCACAA TCGTCTCGCC TGACGAATTC CTCACGGGCG TCGACCCTGC TGGCAACGAT
GCCTCCGACA CCACAGAGAC AGACGAGAGC CCTCAGGTCG CTGACGGTGA CGACACTGAT
GAGCGCAATA TCATCCTTGG TACGGAGGAT CTCGATCAGC TCTCTGGCGG CGCGACCGAT
GATGAAATCT CGGGGCTGGG GGGCGATGAT CAGATCAACG GCTATGACGG CAATGACTAC
CTCAGCGGTG GCGCGGGTGC GGATGACCTT TATGGCGCGG CCGGAGAAGA TACACTCCAC
GGCGACGCGG GCGACGATCA CCTCGACGGA GGAGAGGGAC AGGATTCTCT TTCGGGGGGC
GACGGCGCTG ATTCCCTGTT GGGCGGGCTG GAGGCGGACA GCTTGCAGGG CGACGCCGGC
GACGACACGC TGCATGGCGG CTCCGGCGCA GATGTGGTCG CGGGCGGCGC GGGCAGCGAT
GCGGTGCATG GCAACGACGA TGACGACCGT GTGTTTGGCG GCGCGGGCGA GGACACGCTG
TTTGGCGGGC GTGGCAATGA CGTGGTCACG GGCGCAGACG ACGATGCAGA GCGCGACTTT
ATCAACGGCG GTGACGGCGA CGACACGTTG ATTGCCGGGG CGTCGGATTA CGTCACAGGT
GGCGATGGCG CGGACCAGAT ACTGCTTGGC GATTGGATCG CACAAGGCAC TGTCGAGCTG
GTCGATTTCA ACAGCGCCGA GGATCAGCTC CTCCTGATCT ATGATAGCGC GCAGGGTCTG
CCCGAGCTGG AGCTCGAACC CGACCCGGAC ACGCCGGGAC AGACACTTGT GCGTCTGGAC
GGAGAGATCG CCATGCGCCT CACCGGGGCT GAGACCCTGA CAGCAGATGA GATCTTGCTG
GTGGAGGCCG AGGCGGGCGA CGTGGCGCAT CTGCCATTGC CAGAATAG
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| Protein sequence | MLWLASILGM VAVGSAIMID FESDDADSDE TNPDAEADGT GSTIVSPDEF LTGVDPAGND
ASDTTETDES PQVADGDDTD ERNIILGTED LDQLSGGATD DEISGLGGDD QINGYDGNDY
LSGGAGADDL YGAAGEDTLH GDAGDDHLDG GEGQDSLSGG DGADSLLGGL EADSLQGDAG
DDTLHGGSGA DVVAGGAGSD AVHGNDDDDR VFGGAGEDTL FGGRGNDVVT GADDDAERDF
INGGDGDDTL IAGASDYVTG GDGADQILLG DWIAQGTVEL VDFNSAEDQL LLIYDSAQGL
PELELEPDPD TPGQTLVRLD GEIAMRLTGA ETLTADEILL VEAEAGDVAH LPLPE
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