Gene TM1040_0077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0077 
Symbol 
ID4075974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp80070 
End bp80933 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content63% 
IMG OID638005364 
Productglycosyl transferase family protein 
Protein accessionYP_612072 
Protein GI99079918 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCG TCACGCTTGT CACGGTTGCC TATAATTCTG CGGCGGTGCT GCCGACCCTG 
CTGGCCTCAA TCCCTGCGGG CGTGGACTGT ATCGTGGTCG ATAACGGGTC CAAGGATCCG
GGTGAAATTC GGGATCTGGC GCAAGCCCAT GGCGCAGAAT TCATAGCCTC AGAACGCAAC
ATCGGCTTTG GCCGGGGCTG TAATCTCGGC GCGGCACGGG CGACAATGGA GTTCCTGTTT
TTCGTCAATC CCGACGCCCA GCTTGCGCCC GGCGCGATCG AGGCGCTTCT GGCGGCCGCT
GACGCGCACC CTGACGCCTG CGCCTTCAAC CCCCGCCTGC GCGAGGGCAA TGGCAAGGTC
GCCTTTAAAC GGCGCAGCAA ACTCTTGCCC AAGGCGCAGT GGTTGCCGCG CGAGGCGGCT
GACGCGGATT GCGAGCTACC CGTTTTGCAA GGCTCTGCGA TTTTTGTGCG CCGCGCGGCG
TTCGAAGCTG TTAAGGGCTT TGATCCGAAG ATCTTTCTCT ATCACGAGGA TGACGACCTG
AGCCTCCGGC TCAAGGCTGA CTGTGGACCG CTGCGGCTGG TGACAGGCGC TGAGGTGGTG
CATCTCTTTG GCGAATCCAC CGCGCGGTCA CCGCGGACGG CGGCGCTCAA GGCCTGGTAC
ATGGGTCAAT CCCGTGTCTA CGCCTGCCGC AAACACGGGA TGCCCAACGC CTTTGGAAAT
GCCCTGATCG AAGCCCTGAG CAAGCTTCTG TCGCCACTCA CCCTGCTGTC GGCGCGCAAA
CGGGCGAAAC ACCTGGCCTT TCTGCGTGGG GTTTTGGCCG CACGTCAATG TGCGGACGCG
CTCAAGCCCT TTGACGCACG CTAG
 
Protein sequence
MTRVTLVTVA YNSAAVLPTL LASIPAGVDC IVVDNGSKDP GEIRDLAQAH GAEFIASERN 
IGFGRGCNLG AARATMEFLF FVNPDAQLAP GAIEALLAAA DAHPDACAFN PRLREGNGKV
AFKRRSKLLP KAQWLPREAA DADCELPVLQ GSAIFVRRAA FEAVKGFDPK IFLYHEDDDL
SLRLKADCGP LRLVTGAEVV HLFGESTARS PRTAALKAWY MGQSRVYACR KHGMPNAFGN
ALIEALSKLL SPLTLLSARK RAKHLAFLRG VLAARQCADA LKPFDAR