Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0077 |
Symbol | |
ID | 4075974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 80070 |
End bp | 80933 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638005364 |
Product | glycosyl transferase family protein |
Protein accession | YP_612072 |
Protein GI | 99079918 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCG TCACGCTTGT CACGGTTGCC TATAATTCTG CGGCGGTGCT GCCGACCCTG CTGGCCTCAA TCCCTGCGGG CGTGGACTGT ATCGTGGTCG ATAACGGGTC CAAGGATCCG GGTGAAATTC GGGATCTGGC GCAAGCCCAT GGCGCAGAAT TCATAGCCTC AGAACGCAAC ATCGGCTTTG GCCGGGGCTG TAATCTCGGC GCGGCACGGG CGACAATGGA GTTCCTGTTT TTCGTCAATC CCGACGCCCA GCTTGCGCCC GGCGCGATCG AGGCGCTTCT GGCGGCCGCT GACGCGCACC CTGACGCCTG CGCCTTCAAC CCCCGCCTGC GCGAGGGCAA TGGCAAGGTC GCCTTTAAAC GGCGCAGCAA ACTCTTGCCC AAGGCGCAGT GGTTGCCGCG CGAGGCGGCT GACGCGGATT GCGAGCTACC CGTTTTGCAA GGCTCTGCGA TTTTTGTGCG CCGCGCGGCG TTCGAAGCTG TTAAGGGCTT TGATCCGAAG ATCTTTCTCT ATCACGAGGA TGACGACCTG AGCCTCCGGC TCAAGGCTGA CTGTGGACCG CTGCGGCTGG TGACAGGCGC TGAGGTGGTG CATCTCTTTG GCGAATCCAC CGCGCGGTCA CCGCGGACGG CGGCGCTCAA GGCCTGGTAC ATGGGTCAAT CCCGTGTCTA CGCCTGCCGC AAACACGGGA TGCCCAACGC CTTTGGAAAT GCCCTGATCG AAGCCCTGAG CAAGCTTCTG TCGCCACTCA CCCTGCTGTC GGCGCGCAAA CGGGCGAAAC ACCTGGCCTT TCTGCGTGGG GTTTTGGCCG CACGTCAATG TGCGGACGCG CTCAAGCCCT TTGACGCACG CTAG
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Protein sequence | MTRVTLVTVA YNSAAVLPTL LASIPAGVDC IVVDNGSKDP GEIRDLAQAH GAEFIASERN IGFGRGCNLG AARATMEFLF FVNPDAQLAP GAIEALLAAA DAHPDACAFN PRLREGNGKV AFKRRSKLLP KAQWLPREAA DADCELPVLQ GSAIFVRRAA FEAVKGFDPK IFLYHEDDDL SLRLKADCGP LRLVTGAEVV HLFGESTARS PRTAALKAWY MGQSRVYACR KHGMPNAFGN ALIEALSKLL SPLTLLSARK RAKHLAFLRG VLAARQCADA LKPFDAR
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