| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0073 |
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| Symbol | |
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| ID | 4075970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 75566 |
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| End bp | 76279 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005360 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_612068 |
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| Protein GI | 99079914 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCC GCGCCGCATT GGGGCTCAGG GTGGCCAGCG ATGCACCGCC GGATGACATT
CGCCGGGCGA TTGCGCGCTC GGACACTGCT GTTGTGCGCA GCCTTTGCCT GGTCCCGGAT
CCCGGTGTGA TCTGCGGCAA GTTTTTGCGC TTGCAACGCT ATTGCGCGCT CGAAATTCGG
ATGGCTGTTC AGGATGTCGG CGACCGGAGC CTACGACTCG CAATCGATCC AGCGGCATCT
CAAGACCGCG TGGAAGAACA GCTCATTATC CTGCACGCAC TGATGGAGCG CGCAGGGCTT
CAGGTGCGAA CCTCACGGCA GGGTGTCATT CACTGGCAGG ATGCTCCGCC GCTACCCGAG
GTTGACACCG GAACCTCGCA GCGACTGACC GATCATCTGC ATCACCTGAT CGCAAGCGAT
CCGGCACGGG CGTGGCGTAT CGAGGAAACG GCAGCATGGC TTGGCCTCTC GACACGGAGC
CTGCAACGCT ACTTGCTGGC CGAAGGGGGG CGCTTCTCCG CAACCCTGCG CCATATGCGC
ACCAGCCTCG CCTCCGACAT GTTACGCAAC AGCGACCAGA GCCTGGGCGA GATCGGGTTT
TGTTGTGGCT ACGCGGATCA GGCGCATTTT CAGCGGGAAT TTCGCAAAGT CAGCGGTCAG
ACCCCAAGGC GATTTCGCAG CCAACCAAGG GAGAGCGTCA AAACGGCGCT TTGA
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| Protein sequence | MDFRAALGLR VASDAPPDDI RRAIARSDTA VVRSLCLVPD PGVICGKFLR LQRYCALEIR
MAVQDVGDRS LRLAIDPAAS QDRVEEQLII LHALMERAGL QVRTSRQGVI HWQDAPPLPE
VDTGTSQRLT DHLHHLIASD PARAWRIEET AAWLGLSTRS LQRYLLAEGG RFSATLRHMR
TSLASDMLRN SDQSLGEIGF CCGYADQAHF QREFRKVSGQ TPRRFRSQPR ESVKTAL
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