| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0061 |
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| Symbol | |
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| ID | 4078724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 66347 |
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| End bp | 66943 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005348 |
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| Product | outer membrane lipoprotein carrier protein LolA |
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| Protein accession | YP_612056 |
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| Protein GI | 99079902 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0207527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACAGT TTGTCTTTGC CCTTGCGCTT GGCGCAACCT CGCTTGCGTC GGCTGCTGCA
TCCGCGGCCG AACAGCTGAG CCTCAATGAG ATCTCGGCCT ATCTCAACAG CTTTGCCACC
GCGAAGGCCG ATTTTACGCA GGTGAATGAC GACGGCAGCT TGTCGACCGG CACGCTCTAT
CTGCGTCGCC CCGGCAAGGT GCGGTTTGAA TACGCTGACA ATGCTGGGCT GGTGCTGGCA
GAGGCCGGGA CGGTGGCGAT CATGGATCCC AAATCCAACC AACCGCCAGA GACCTACCCG
CTGAGCAGGA CGCCGCTTTC GATCATTCTG GCGCGCAATG TGAACCTAGC GCAGGCCAAT
ATGGTGGTGG GACACGGCTT TGACGGGGTG TCCACCGTGG TGCGCGCCCA AGATCCCAAG
GCACCAGAGC ATGGCAGTAT CGAGATGATG TTCACCGACA ACCCGGTGCA GCTTCGCAAA
TGGGTCATTC ACGGTGGTTC AGGTGAGGAA ACCACCGTCA TTCTTGGCGA GATGCAGACT
GGGTTGTCTT TCCCGTCGAG CTTGTTCAGC ATCTCCCGTC CAAAACGCGA CCGCTGA
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| Protein sequence | MKQFVFALAL GATSLASAAA SAAEQLSLNE ISAYLNSFAT AKADFTQVND DGSLSTGTLY
LRRPGKVRFE YADNAGLVLA EAGTVAIMDP KSNQPPETYP LSRTPLSIIL ARNVNLAQAN
MVVGHGFDGV STVVRAQDPK APEHGSIEMM FTDNPVQLRK WVIHGGSGEE TTVILGEMQT
GLSFPSSLFS ISRPKRDR
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