| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0057 |
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| Symbol | |
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| ID | 4078720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 59044 |
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| End bp | 60270 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005344 |
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| Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase / 2-octaprenyl-6-methoxyphenol hydroxylase |
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| Protein accession | YP_612052 |
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| Protein GI | 99079898 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.680846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.68112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATA CGCGTGATAT CCTGATTGTG GGCGGAGGCC TGAATGGTCC GTCGCTTGCT
CTTGCGCTGG CACAGGCTGG CCATTCTGTG ACCCTGATCG ACGCGCTTCC GGCGCCCCTG
CGCGAGGACG CCGAATTTGA CGGCCGTTCC TATGCTCTGG CGCTTGCCTC GACGCGGCTC
CTGCAACAGA TCGGGATCTG GGCAGTTATC GAGGATCACG CTCAACCGAT GAACGAGATC
AAGGTTAGCG ACGGCGTTGC CGGTCGCGGC CCTTCGCCGC TTTTCCTGCA TTTTGAGGAA
AGCGACCTCG ACGAGGGCCC CATGGGCTAC ATGGTCGAAG ATCGCTACCT GCGCCGCGCC
CTTCTGAAAG CACTCGAGGC CGAGCCAAAA ATCACCCAGA TCTCGGGCCA GCCTGTGATC
GCACAGACCG TGAGTGCGGA TGCCATCACC GTCACTCTCG AAGATGGCAC ACAGCTCTCG
GGTGCGCTTT TGGTCGGCGC GGATGGACGT CAAAGCGGCA CCGCCGCGCG CGCCGGCATC
AAGCGCACCG GGTGGGATTA CGGCCAGACC GCACTGGTCT GCGCTATCTC ACATGCGCAA
CCTCACAACG GCATTGCCCA TCAGTTCTTT ATGCCGCCGG GGCCGCTTGC AATTCTGCCG
TTGCCGGGCA ATCGCAGCTC TATTGTCTGG AGTGAGACTC ATGCCGAGGC TGCGCGCATT
CAGGCACTTT CGGATCAGGA CTACCTCTCG GTGCTGCGCC CCCGGTTTGG GTCTTTCCTC
GGAGAGATCG ATTTGGAAGG CAAGCGCTTC AGCTATCCGC TGAAATTGAG CCTTGCCAAT
GCCTTTTATG GCGAGCGACT GGCCTTGGTG GGCGATGCGG CGCATGGGCT GCACCCGATC
GCGGGCCAGG GACTCAATGC GGGGCTGCGC GACATCGCCA GCCTTGCAGA AGTTCTGACC
GATGCAGCGC GGCGCGGTGA GGATCTCGCC AGCCCCTTGG TTCTGGCGCG CTATCAACAG
TGGCGCCGGT TCGACACCAC CTCTCTCGCG CTAGCGACAG ATGTGTTCAA CAAGCTGTTT
TCAAACGACA ATCCTATCCT GCGCGCCACC CGAGATCTGG GGCTTGGCCT CACAAATGCA
CTGCCTGGCC TACGCCGAGG TTTTGTGCGC GAAGCGGCAG GACTTTCGGG AGATTTGCCG
CGCCTGTTGC GCGGGCGCCC GCTCTGA
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| Protein sequence | MTDTRDILIV GGGLNGPSLA LALAQAGHSV TLIDALPAPL REDAEFDGRS YALALASTRL
LQQIGIWAVI EDHAQPMNEI KVSDGVAGRG PSPLFLHFEE SDLDEGPMGY MVEDRYLRRA
LLKALEAEPK ITQISGQPVI AQTVSADAIT VTLEDGTQLS GALLVGADGR QSGTAARAGI
KRTGWDYGQT ALVCAISHAQ PHNGIAHQFF MPPGPLAILP LPGNRSSIVW SETHAEAARI
QALSDQDYLS VLRPRFGSFL GEIDLEGKRF SYPLKLSLAN AFYGERLALV GDAAHGLHPI
AGQGLNAGLR DIASLAEVLT DAARRGEDLA SPLVLARYQQ WRRFDTTSLA LATDVFNKLF
SNDNPILRAT RDLGLGLTNA LPGLRRGFVR EAAGLSGDLP RLLRGRPL
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